GitHub / AngryMaciek 42 Repositories
PhD in Computational Biology
AngryMaciek/angrymaciek.github.io
My GitHub page [https://angrymaciek.github.io]
Language: HTML - Size: 2.72 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

AngryMaciek/hypercomplex
Abstract & fast header-only C++ template library for lattice-based cryptosystems in high-dimensional algebras
Language: C++ - Size: 2.13 MB - Last synced at: 2 days ago - Pushed at: 11 months ago - Stars: 3 - Forks: 1

AngryMaciek/toolkit Fork of overleaf/toolkit
Size: 811 KB - Last synced at: 8 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

AngryMaciek/overleaf Fork of overleaf/overleaf
A web-based collaborative LaTeX editor
Size: 188 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

AngryMaciek/angry-runner
Docker image recipe for a self-hosted GitHub Actions runner / development environment
Language: Dockerfile - Size: 38.1 KB - Last synced at: 8 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

AngryMaciek/zarp Fork of zavolanlab/zarp
Zavolan-Lab Automated RNA-Seq Pipeline
Language: Python - Size: 23.8 MB - Last synced at: 8 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

AngryMaciek/prezto Fork of sorin-ionescu/prezto
The configuration framework for Zsh
Language: Shell - Size: 2.12 MB - Last synced at: 4 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

AngryMaciek/vscode
Size: 9.77 KB - Last synced at: 8 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

AngryMaciek/angry-bubblefuck 📦
Bubble sort implemented in brainfuck 🤯
Language: Brainfuck - Size: 65.4 KB - Last synced at: 8 months ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

AngryMaciek/angry-pink-purse
Who knows what can you find inside?
Language: Python - Size: 35.2 KB - Last synced at: 8 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 1

AngryMaciek/efcomp
Advanced methods for efficient scientific computing in Python/R/C++
Language: Jupyter Notebook - Size: 298 KB - Last synced at: 8 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

AngryMaciek/MAPP Fork of gruber-sciencelab/MAPP
🗺️ MAPP is a computational method which enables identification of binding motifs for RNA-binding proteins that shape pre-mRNA processing under specific conditions.
Language: Python - Size: 2.39 MB - Last synced at: 8 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

AngryMaciek/warlock
Warlock is a snakemake workflow to spawn multiple demons (deme-based oncology models) as jobs running around on a cluster environment 😈😈
Language: Python - Size: 284 KB - Last synced at: 8 months ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0

AngryMaciek/devcontainer-test
Language: Dockerfile - Size: 5.86 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

AngryMaciek/angry-moran-simulator
A general game-theoretical framework to carry out scientific simulations of populations' evolution according to the Moran model 🧮
Language: Python - Size: 11.6 MB - Last synced at: 2 days ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 5

AngryMaciek/angry-bash
Bash configuration which I use @ work.
Language: Shell - Size: 65.4 KB - Last synced at: 8 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

AngryMaciek/snakemake_fastqc 📦
A small snakemake pipeline to perform quality analysis of RNA-Seq data with FastQC.
Language: Python - Size: 42 KB - Last synced at: 8 months ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0

AngryMaciek/angry-github-hoarder
Simple shell script that creates a backup of all my GitHub repos.
Language: Python - Size: 8.79 KB - Last synced at: 8 months ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

AngryMaciek/angry-vim
Vim configuration which I use @ work.
Language: Python - Size: 955 KB - Last synced at: 8 months ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

AngryMaciek/angry-system-setup
Setup commands for a fresh OS
Language: Shell - Size: 6.74 MB - Last synced at: 8 months ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

AngryMaciek/vim-airline Fork of vim-airline/vim-airline
lean & mean status/tabline for vim that's light as air
Language: Vim Script - Size: 3.55 MB - Last synced at: 8 months ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

AngryMaciek/angry-dotfiles 📦
My collection of configuration files
Size: 24.4 KB - Last synced at: 8 months ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/vim-fugitive Fork of tpope/vim-fugitive
fugitive.vim: A Git wrapper so awesome, it should be illegal
Language: Vim Script - Size: 2.51 MB - Last synced at: 8 months ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

AngryMaciek/vim-gitgutter Fork of airblade/vim-gitgutter
A Vim plugin which shows git diff markers in the sign column and stages/previews/undoes hunks and partial hunks.
Language: Vim Script - Size: 1.3 MB - Last synced at: 8 months ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

AngryMaciek/soRting 📦
Very inefficient sorting algorithms in R
Language: R - Size: 2.93 KB - Last synced at: 8 months ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

AngryMaciek/bindz-rbp Fork of zavolanlab/bindz-rbp
RBP module for bindz, a bioinformatics tool to detect regulators' binding sites on RNA sequences.
Size: 789 KB - Last synced at: 8 months ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

AngryMaciek/snakemake_vast_tools 📦
My personal snakemake pipeline for VAST-TOOLS execution
Language: Python - Size: 61.5 KB - Last synced at: 8 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/angry-conda-environments 📦
My personal collection of conda virtual environments dedicated to specific tasks
Language: Shell - Size: 40 KB - Last synced at: 8 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/codemoji 📦
🔥🎮😈🍫🍕💦🌵😘
Language: Python - Size: 1.18 MB - Last synced at: 8 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/angry-polynomial-interpolator 📦
This is a very simple polynomial interpolator implemented in Fortran 90 📉
Language: Fortran - Size: 9.77 KB - Last synced at: 8 months ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/snakemake_deeptools 📦
Small snakemake pipeline to explore RNA-Seq data with deepTools.
Language: Python - Size: 31.3 KB - Last synced at: 8 months ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/snakemake_suppa2 📦
A snakemake workflow to perform Alternative Splicing analysis from RNA-Seq with SUPPA2.
Language: Python - Size: 2.89 MB - Last synced at: 8 months ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 1

AngryMaciek/snakemake_qdgedtu 📦
RNA-Seq data analysis: Quantification, Differential Gene Expression, Differential Transcripts Usage
Language: R - Size: 83 KB - Last synced at: 8 months ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/angry-droid 📦
Tutorial on how to turn your Android smartphone into a platform for scientific computational simulations. 📱
Language: Shell - Size: 256 KB - Last synced at: 8 months ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 1

AngryMaciek/angry-skeletor
Generate text files based on pre-defined templates.
Language: Python - Size: 1.61 MB - Last synced at: 8 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

AngryMaciek/angrymaciek
Size: 4.88 KB - Last synced at: 8 months ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

AngryMaciek/academicpages.github.io Fork of academicpages/academicpages.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Size: 49 MB - Last synced at: 8 months ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

AngryMaciek/ToyRcpp
Toy examples of how to utilise Rcpp interface to pass the data from R to C++ and call the procedures useful for statistical modelling within. 📚
Language: C - Size: 28.3 KB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/ToySnake
Toy examples of how to utilise pybind11 interface to pass the data from Python to C++
Language: Python - Size: 38.1 KB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/numDeriv.c
Reimplementation of the R numDeriv library into C 🔧
Language: C - Size: 30.3 KB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/programming-for-life-sciences Fork of zavolanlab/programming-for-life-sciences
Toy repository for the Programming for Life Sciences course at the Biozentrum, University of Basel
Size: 19.5 KB - Last synced at: 8 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/badsoRts
A Collection Of Really Inefficient Sorting Algorithms
Language: R - Size: 78.1 KB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/angry-cookiecutters
My cookiecutter templates for new projects.
Language: Python - Size: 219 KB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/molokai Fork of tomasr/molokai
Molokai color scheme for Vim
Size: 380 KB - Last synced at: 8 months ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

AngryMaciek/angry-statistical-computing
Small examples on how to jump into statistical modelling in C++
Language: C - Size: 40 KB - Last synced at: over 2 years ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
