AntoinePassemiers/DAGIP

Bias correction tool for cell-free DNA data (coverage, methylation, fragmentomics, etc.)

Size: 2.72 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 3 - Forks: 0

AntoinePassemiers/Feature-Selection-Benchmark

Official source code for the paper "A quantitative benchmark of neural network feature selection methods for detecting nonlinear signals." by Passemiers et al.

Language: Python - Size: 13.7 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

AntoinePassemiers/Wynona

Protein Residue Contact Prediction based on a Deep Neural Architecture

Language: Python - Size: 126 KB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 3 - Forks: 0

AntoinePassemiers/Spatial-Games

Evolutionary dynamics in a spatial context

Language: Python - Size: 364 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 1

AntoinePassemiers/Neuhon

Musical key detection library & Bachelor thesis on key detection

Language: Clojure - Size: 11.4 MB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 3 - Forks: 0

AntoinePassemiers/Recursive-Least-Squares-Algorithm-With-Kafka-And-Spark

Remote repository for the INFO-H-515 Big data project (phase 2)

Language: Jupyter Notebook - Size: 2.91 MB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 3 - Forks: 0

AntoinePassemiers/Open-Challenges-Single-Cell-Perturbations

20th solution for Kaggle's competition "Open Problems – Single-Cell Perturbations"

Language: Jupyter Notebook - Size: 8.74 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

AntoinePassemiers/NIH-EEG

[Kaggle] HMM-based application for predicting seizures from intracranial EEG recordings

Language: Python - Size: 35.2 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0

AntoinePassemiers/MKP

Heuristic Solver for the Multidimensional Knapsack Problem

Language: C - Size: 37.1 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 3 - Forks: 2

AntoinePassemiers/Oriana

Variational Inference library for Probabilistic Count Matrix Factorization (pCMF) and single-cell expression data analysis

Language: Python - Size: 67.4 KB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 4 - Forks: 1

AntoinePassemiers/Learning-Chaos Fork of RobinPetit/Learning-Chaos

Language: Python - Size: 626 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

AntoinePassemiers/Jerry-The-Race-Car-Driver

He drives so goddamn fast!

Language: C++ - Size: 36.1 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

AntoinePassemiers/GRADIS Fork of MonaRazaghi/GRADIS

Assessing the robustness of the results presented in "Supervised learning of gene regulatory networks based on graph distance profile of transcriptomics data"

Language: MATLAB - Size: 106 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

AntoinePassemiers/Master-Thesis

Master Thesis on Protein Contact Prediction

Language: TeX - Size: 24.3 MB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 3 - Forks: 0

AntoinePassemiers/GDE-GaussFold

Lightning-Fast Template-free Protein Folding based on Predicted Residue Contacts and Secondary Structure

Language: Python - Size: 592 KB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 0

AntoinePassemiers/Cython-Project-Template

Ready-to-use and simple Cython template for long-term projects (with NumPy support)

Language: Python - Size: 4.88 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 4 - Forks: 1

AntoinePassemiers/celfie Fork of christacaggiano/celfie

cfDNA cell type of origin estimation

Language: Jupyter Notebook - Size: 6.31 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

AntoinePassemiers/Scythe

Deep learning library based on the gcForest algorithm

Language: C++ - Size: 551 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 12 - Forks: 4

AntoinePassemiers/Bitonic-Sort

Sorting arbitrary sequences using a bitonic sort algorithm distributed with MPI

Language: C++ - Size: 269 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 1

AntoinePassemiers/Beyond-Gradient-Descent

Minimalist deep learning library with first and second-order optimization algorithms made for educational purpose

Language: Python - Size: 3.4 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 9 - Forks: 3

AntoinePassemiers/AntoinePassemiers

Config files for my GitHub profile.

Size: 0 Bytes - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

AntoinePassemiers/ArchMM

A Cython Machine Learning library dedicated to Hidden Markov Models

Language: Python - Size: 5.84 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 33 - Forks: 1

AntoinePassemiers/P-Center-Problem

Solving P-Center Problem using P1 and P3 formulations

Language: Julia - Size: 1.48 MB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 1 - Forks: 1

AntoinePassemiers/Wasserstein-Mass-Spectrometry

Unofficial implementation of the paper "The Wasserstein Distance as a Dissimilarity Measure for Mass Spectra with Application to Spectral Deconvolution"

Language: C++ - Size: 4.15 MB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 0

AntoinePassemiers/Stochastic-Unit-Commitment

Stochastic Unit Commitment for Renewable Energy Supply using Lagrangian Decomposition

Language: Python - Size: 1.4 MB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 24 - Forks: 7

AntoinePassemiers/Realistic-Mouse

Realistic mouse movements for building click bots

Language: Python - Size: 1.57 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 18 - Forks: 2

AntoinePassemiers/PORTIA-Manuscript

Source code for the paper "Fast and Accurate Inference of Gene Regulatory Networks through Robust Precision Matrix Estimation", by Passemiers et al.

Language: Python - Size: 165 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 6 - Forks: 0

AntoinePassemiers/PORTIA

A Lightning-fast algorithm for Gene Regulatory Network inference from gene expression data

Language: Python - Size: 381 KB - Last synced at: 23 days ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 1

AntoinePassemiers/PFSP-WT

Heuristic solver based on Ant Colony Optimization and designed for the Permutation Flow Shop Scheduling Problem with Weighted Tardiness (PFSP-WT)

Language: Python - Size: 15.6 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 7 - Forks: 1

AntoinePassemiers/MMO-Torch

Matrix Manifold Optimization with PyTorch

Language: Python - Size: 35.2 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 5 - Forks: 1

AntoinePassemiers/Encoder-Forest

eForest: Reversible mapping between high-dimensional data and path rule identifiers using trees embedding

Language: Python - Size: 60.5 KB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 23 - Forks: 9

AntoinePassemiers/Cythrinsic

Header files for allowing Intel intrinsics in Cython

Language: Python - Size: 38.1 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 8 - Forks: 0

AntoinePassemiers/Lexicon-Based-Sentiment-Analysis

Lexicon-based sentiment analysis inspired by Syuzhet R package

Language: Python - Size: 626 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 21 - Forks: 6

AntoinePassemiers/ChIP-seq-Peak-Caller

Peak Calling algorithm for Chromatin-immunoprecipitation sequencing (ChIP-seq) data

Language: Python - Size: 188 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0

AntoinePassemiers/Motionlens

Sending mobile sensory data to a server as binary data

Language: Java - Size: 186 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 2

AntoinePassemiers/Waveon

Software for splitting speech and sound effects in wave files

Language: Python - Size: 4.88 KB - Last synced at: over 1 year ago - Pushed at: almost 8 years ago - Stars: 0 - Forks: 0