BioData-Club/jekyll-academic Fork of NCSU-Libraries/jekyll-academic

Live GitHub Page at

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BioData-Club/webscraping_workshop Fork of samifriedrich/webscraping_workshop

A Jupyter Notebook-based workshop on web scraping in python

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BioData-Club/diy-documentation Fork of ericearl/diy-documentation

A BioData Club Workshop on Markdown and Read the Docs.

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BioData-Club/Workshop_ReproduciblePaper Fork of ablucher/Workshop_ReproduciblePaper

A Practical Guide to Reproducible Papers

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BioData-Club/ghpages-rtd

The ReadTheDocs version of the BioData Club's GitHub Pages Tutorial

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BioData-Club/TableauWorkshop Fork of ConnorJPSmith/TableauWorkshop

Repository for Tableau Workshop at OHSU

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BioData-Club/programming-fundamentals Fork of swcarpentry/python-novice-inflammation

Programming fundamentals lesson based on the Software Carpentry Programming with Python lesson.

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BioData-Club/sql_workshop Fork of LuciMoore/sql_workshop

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BioData-Club/introduction-git Fork of probinso/introduction-git

marp slides and material for git talk

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BioData-Club/obo-tutorial Fork of OHSU-Library/obo-tutorial

A tutorial on using Open Biological and Biomedical Ontologies (OBO) to create better biodata

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BioData-Club/Friendly-Intro-to-R

Danielle and Lilly teach a v friendly intro to R and R Studio.

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BioData-Club/latex-course Fork of jdleesmiller/latex-course

An interactive introduction to LaTeX using Overleaf.

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BioData-Club/BioDataIntroDataVizSlides Fork of WatanabeSmith/BioDataIntroDataVizSlides

Slides for Intro to Data Viz workshop

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BioData-Club/data_donuts_af_am_history

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BioData-Club/nhanes_explore Fork of laderast/nhanes_explore

Shiny App for Exploring the NHANES dataset

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BioData-Club/my-first-rtd

A sample repository for use in the BioData Club DIY Documentation Workshop

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BioData-Club/gradual_shiny Fork of laderast/gradual_shiny

Workshop introducing Shiny programming concepts

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BioData-Club/data_storytelling_bdc Fork of laderast/data_storytelling_bdc

Data Storytelling Workshop for BioData Club

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BioData-Club/dataDonutsJeffLeek

Repository for discussing How to be a modern scientist

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BioData-Club/logregression-workshop

In biomedical research we often wish to classify data into two or more groups (eg. healthy and diseased) based on a variety of measurement variables, but how do you determine if the model you’ve selected is good? In this BioData Club workshop instructor Crista Moreno will discuss the mathematics of logistic regression for binary classification modeling, and how to prevent the harms of overfitting with cross validation in R. Attendees will gain knowledge through hands-on exercises about the following concepts and data science skills. Logistic regression (logit function, probability, binary classification) Overfitting (adding parameters and high dimensional spaces) Cross validation Cross validation Error R (R markdown, R packages magrittr, dplyr, ggplot2, tidyr, corrplot, caret, rgl) Anyone with interest in building a classification model for biomedical data is encouraged to attend! Prior experience with R, Rstudio, and a basic knowledge of classification modeling (also mathematical functions) will be helpful, but is not a requirement.

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BioData-Club/BioData-Club.github.io

BioData Club website and project management

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BioData-Club/githubPagesTutorial

Tutorial on Setting Up a Github Page

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