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GitHub / Ecological-Complexity-Lab 2 Repositories

Our (new!) research group studies the complexity of ecological systems

Ecological-Complexity-Lab/Sequential_LP Fork of hexie1995/Sequential-Link-Prediction

We present a temporal optimal link prediction method that is based on the stacking link prediction method.

Language: Python - Size: 6.22 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/lab_website

Our lab website

Language: HTML - Size: 364 MB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 1 - Forks: 1

Ecological-Complexity-Lab/eco_ILP

Code and data for the paper "Inductive link prediction boosts data availability and enables cross-community link prediction in ecological networks"

Language: Jupyter Notebook - Size: 408 MB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/Norwood_farm

Language: R - Size: 450 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/rumen_microbiome_structure

this is a reiteration of microbiome_structure_v2 with cleaner folder tree and fixed intralayer edge weights.

Language: HTML - Size: 9.26 GB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/spatial_modularity_in_the_canary_islands

Code and data accompanying the paper "Local and regional processes drive distance decay in structure in a spatial multilayer plant-pollinator network"

Language: R - Size: 1.34 GB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/link_prediction_project

Ofir and Eden Project of link prediction

Language: Jupyter Notebook - Size: 5.99 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/infomap_ecology_package

Package with functions to handle network data and run Infomap, inspired by ecological networks

Language: R - Size: 14.7 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 24 - Forks: 2

Ecological-Complexity-Lab/Plasmid_multilayer_networks

Data and scripts for analysis in Shapiro et al., "Multilayer Networks of Plasmid Genetic Similarity Reveal Potential Pathways of Gene Transmission"

Language: R - Size: 192 MB - Last synced at: 4 months ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0

Ecological-Complexity-Lab/emln

An R package for handling and manipulating multilayer network data, mainly for ecological networks

Language: R - Size: 1.09 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 6 - Forks: 1

Ecological-Complexity-Lab/metabolic_corrs_networks_analysis

sharon's project- creating networks of correlations between metabolites in different bacteria strains (before/after evolution) and analyzing them to catch the effect of evolution

Language: R - Size: 131 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/cancer-networks

Language: Jupyter Notebook - Size: 121 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

Ecological-Complexity-Lab/emln_package

About emln: An R package that contains 81 ecological multilayer networks for analysis

Language: R - Size: 44 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/Poll_Seed-disp_Multilayer_Patagonia

Codes and data to

Language: R - Size: 4.07 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/COVID19_vaccine_model

Language: R - Size: 41.8 MB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/network-navigator Fork of mapequation/network-navigator

Interactive hierarchical network navigator

Language: Python - Size: 13.3 MB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

Ecological-Complexity-Lab/CRISPR_networks

Language: R - Size: 114 MB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0