Gardner-BinfLab/PCPBResults

Data and results for the paper "Flawed machine-learning confounds coding sequence annotation"

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Gardner-BinfLab/PCPB

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Gardner-BinfLab/beth-thesis

Language: Gnuplot - Size: 400 MB - Last synced: 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 1

Gardner-BinfLab/genome-randomisation-survey

A survey of methods for randomising genome sequences

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Gardner-BinfLab/thesis-bikash

Final version uwu 😊

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Gardner-BinfLab/TIsigner

Translation Initiation coding region designer

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Gardner-BinfLab/Avoidance

RNA avoidance scripts and data.

Language: R - Size: 61.8 MB - Last synced: 2 months ago - Pushed: about 6 years ago - Stars: 1 - Forks: 2

Gardner-BinfLab/sRNA_evo

Beths sRNA evolution project, and other scripts

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Gardner-BinfLab/robustness-RNP

A series of comparisons of the mutational robustness of RNAs and proteins.

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Gardner-BinfLab/Non-codingDBS

A repository to keep files for Delta-bitscore non-coding variation project.

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Gardner-BinfLab/RNA_Interactions_Benchmark

RNA-RNA interaction predictions tools benchmark scripts, wrappers and datafiles.

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Gardner-BinfLab/deltaBS

Quantifying the significance of genetic variation using probabilistic profile-based methods.

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Gardner-BinfLab/AREBA

A RNA Encyclopaedia for Bacteria and Archaea

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Gardner-BinfLab/invasive_campylobacter

Data and code to accompany our work on invasive Campylobacter isolates

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Gardner-BinfLab/ncVarDB

Repo for the ncVAR database

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Gardner-BinfLab/invasive_salmonella

Data and code to accompany our paper on identifying patterns of gene degradation associated with invasiveness in Salmonella

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Gardner-BinfLab/Razor_paper_2021

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Gardner-BinfLab/lars-thesis

Lars Barquist's Thesis

Size: 189 MB - Last synced: 2 months ago - Pushed: over 10 years ago - Stars: 0 - Forks: 2

Gardner-BinfLab/SoDoPE_paper_2020

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Gardner-BinfLab/TISIGNER-ReactJS

TISIGNER: Unleash the power of synthetic biology

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Gardner-BinfLab/EnTrI

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Gardner-BinfLab/Compartmentalisation_Marsden2019

Language: R - Size: 2.44 MB - Last synced: 2 months ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0

Gardner-BinfLab/PPI_Analysis_2022

An accurate, scalable and generalisable tool for predicting protein-protein interactions

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Gardner-BinfLab/Razor

Tool to predict eukaryotic signal peptides. In addition, prediction of toxin and fungi signal peptides is also done.

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Gardner-BinfLab/speed-vs-accuracy-meta-analysis

scripts and datasets associated with a study of benchmarks of bioinformatic software

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Gardner-BinfLab/TIsigner_paper_2019

Code related to TIsigner manuscript and webserver

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Gardner-BinfLab/Streptococcus-pyogenes

Streptococcus pyogenes

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Gardner-BinfLab/uniqueome2

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Gardner-BinfLab/Avoidance-v2

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Gardner-BinfLab/twilight_zone

Manuscript, code, important data

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Gardner-BinfLab/meta-analysis-eDNA-software

A meta-analysis of environmental DNA sequence analysis benchmarks

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