Ecosyste.ms: Repos

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GitHub / JustasB 15 repositories

http://SwarmSight.org

JustasB/latest_blender_url

Retrieves the latest Blender download URL, for use in e.g. Travis CI

Language: Python - Size: 11.7 KB - Last synced: 30 days ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 0

JustasB/hoc2swc

Converter for NEURON simulator HOC files to SWC

Language: AMPL - Size: 293 KB - Last synced: 28 days ago - Pushed: over 3 years ago - Stars: 11 - Forks: 1

JustasB/linetimer

A small Python class to measure the time taken by indented lines

Language: Python - Size: 36.1 KB - Last synced: 28 days ago - Pushed: about 2 years ago - Stars: 48 - Forks: 8

JustasB/LFPsimpy

Zero-model-modification, MPI-compatible Python package to compute extracellular Local Field Potentials (LFPs) for NEURON simulator models

Language: Jupyter Notebook - Size: 177 KB - Last synced: 28 days ago - Pushed: over 3 years ago - Stars: 6 - Forks: 5

JustasB/OlfactoryBulb

Biophysically Realistic Model of the Olfactory Bulb Mitral-Tufted-Granule Cell Pathway

Language: Jupyter Notebook - Size: 305 MB - Last synced: about 2 months ago - Pushed: almost 3 years ago - Stars: 8 - Forks: 3

JustasB/BlenderNEURON

Exports 3D structure and activity from NEURON simulator to Blender

Language: Python - Size: 96.9 MB - Last synced: 5 months ago - Pushed: almost 2 years ago - Stars: 25 - Forks: 6

JustasB/pytorch-grad-cam Fork of jacobgil/pytorch-grad-cam

Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.

Language: Python - Size: 108 MB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 0

JustasB/SwarmSight

SwarmSight is a published video analysis tool with modules to a) to track insect antenna and proboscis movements and b) assess the aggregate movement or activity levels of groups or swarms of animals. Developed at Arizona State University, it is used by behavioral scientists to study the behavior of insects, birds, fish, and other animals.

Language: C# - Size: 302 MB - Last synced: 5 months ago - Pushed: almost 2 years ago - Stars: 10 - Forks: 8

JustasB/scidash Fork of BlueBrain/scidash

A collection of candidates, tests, and records for use with SciDash.

Size: 1.77 MB - Last synced: about 1 year ago - Pushed: about 8 years ago - Stars: 0 - Forks: 0

JustasB/cudafy Fork of svn2github/cudafy

GitHub clone of SVN repo https://cudafy.svn.codeplex.com/svn (cloned by http://svn2github.com/)

Language: C# - Size: 7.74 MB - Last synced: about 1 year ago - Pushed: almost 9 years ago - Stars: 0 - Forks: 0

JustasB/GranuleCell Fork of OpenSourceBrain/GranuleCell

GitHub repository for an OSB project containing a cerebellar granule cell based on Maex & De Schutter 1998

Language: XSLT - Size: 576 KB - Last synced: about 1 year ago - Pushed: almost 9 years ago - Stars: 1 - Forks: 0

JustasB/ml-performance-monitoring Fork of newrelic-experimental/ml-performance-monitoring

A Python package for sending model inference data, data metrics, and model metrics

Size: 186 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

JustasB/neuronunit Fork of scidash/neuronunit

A package for data-driven validation of neuron and ion channel models using SciUnit

Language: Jupyter Notebook - Size: 41.8 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

JustasB/pylmeasure Fork of ajkswamy/python-Lmeasure

Python wrapper for L-measure

Language: HTML - Size: 7.66 MB - Last synced: 16 days ago - Pushed: almost 3 years ago - Stars: 3 - Forks: 4

JustasB/adahessian Fork of amirgholami/adahessian

ADAHESSIAN: An Adaptive Second Order Optimizer for Machine Learning

Size: 2.01 MB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

JustasB/label-studio Fork of heartexlabs/label-studio

Label Studio is a multi-type data labeling and annotation tool with standardized output format

Size: 225 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

JustasB/skorch Fork of skorch-dev/skorch

A scikit-learn compatible neural network library that wraps PyTorch

Size: 5.39 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

JustasB/DataScience

Data Science Project Showcase

Language: Jupyter Notebook - Size: 2.4 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

JustasB/ad-blocking Fork of citp/ad-blocking

Prototypes of ad blocking techniques proposed in the "Future of Ad Blocking" paper

Language: JavaScript - Size: 10.3 MB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 1 - Forks: 0

JustasB/neuron-docker

NEURON simulator Docker images

Language: Dockerfile - Size: 7.81 KB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0

JustasB/DockerImages

Stores Dockerfiles for software maintained by IFCAR

Size: 1000 Bytes - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0

JustasB/NeuroMLWebsite Fork of NeuroML/NeuroMLWebsite

The latest version of the NeuroML website

Language: HTML - Size: 88.1 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

JustasB/neuroinf-archive

Archived version of Neuroinf.org

Language: PostScript - Size: 489 MB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

JustasB/sphinxtr Fork of jterrace/sphinxtr

The Sphinx Thesis Resource

Size: 4.21 MB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

JustasB/so-tech-tracker

Language: Jupyter Notebook - Size: 2.93 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

JustasB/Cvapp-NeuroMorpho.org Fork of pgleeson/Cvapp-NeuroMorpho.org

Version of Cvapp as used on NeuroMorpho.org. Based on Robert Cannon's initial implementation.

Language: XSLT - Size: 1.35 MB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

JustasB/myriad Fork of cplab/myriad

Myriad, a GPU-aware biophysical neuronal simulator.

Language: Python - Size: 637 KB - Last synced: about 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

JustasB/vrview Fork of googlearchive/vrview

Language: JavaScript - Size: 40.8 MB - Last synced: about 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

JustasB/brian2genn Fork of brian-team/brian2genn

Brian 2 frontend to the GeNN simulator

Language: Python - Size: 5.05 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

JustasB/sphinx_rtd_theme Fork of readthedocs/sphinx_rtd_theme

Sphinx theme for readthedocs.org

Language: CSS - Size: 10.2 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

JustasB/blender Fork of dfelinto/blender

clone of git://git.blender.org/blender.git + my branches

Language: C - Size: 348 MB - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

JustasB/Chart.js Fork of chartjs/Chart.js

Simple HTML5 Charts using the <canvas> tag

Language: JavaScript - Size: 9.55 MB - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

JustasB/ephys_pink_noise Fork of AllenInstitute/ephys_pink_noise

Creates the pink noise stimuli used in the noise1, noise2, and ramp to rheo stimulus used in the Allen Institute for Brain Science electrophysiology pipeline.

Language: Python - Size: 6.84 KB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

JustasB/jNeuroML Fork of NeuroML/jNeuroML

A single package (command line tool and library) in Java to validate, simulate, translate and analyse NeuroML 2 models

Language: Java - Size: 198 KB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

JustasB/NeuroML2 Fork of NeuroML/NeuroML2

This repository hosts the NeuroML 2 Schema, the ComponentType definitions in LEMS and the core documentation of NeuroML2.

Language: Python - Size: 1.06 MB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

JustasB/MiglioreEtAl14_OlfactoryBulb3D Fork of OpenSourceBrain/MiglioreEtAl14_OlfactoryBulb3D

3D model of the olfactory bulb (Migliore et al. 2014)

Language: OpenEdge ABL - Size: 169 MB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

JustasB/chartjs-plugin-zoom Fork of chartjs/chartjs-plugin-zoom

Zoom and pan plugin for Chart.js

Language: JavaScript - Size: 98.6 KB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

JustasB/ChimpBuilder

A utility for converting MailChimp emails to NationBuilder format

Language: C# - Size: 1.5 MB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

JustasB/PyNeuron-Toolbox Fork of russelljjarvis/docker-stacks-returned

Some python functions to supplement the NEURON python module

Language: Jupyter Notebook - Size: 3.93 MB - Last synced: about 1 year ago - Pushed: over 7 years ago - Stars: 1 - Forks: 0

JustasB/MitralSuite

Validation of Olfactory Bulb Mitral Cell models with data from NeuroElectro.org using NeuronUnit framework

Language: Jupyter Notebook - Size: 8.61 MB - Last synced: about 1 year ago - Pushed: over 7 years ago - Stars: 3 - Forks: 3

JustasB/cayman Fork of pages-themes/cayman

Cayman is a Jekyll theme for GitHub Pages

Language: CSS - Size: 126 KB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

JustasB/Hystrix Fork of Netflix/Hystrix

Hystrix is a latency and fault tolerance library designed to isolate points of access to remote systems, services and 3rd party libraries, stop cascading failure and enable resilience in complex distributed systems where failure is inevitable.

Language: Java - Size: 8.99 MB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

JustasB/PospischilEtAl2008 Fork of OpenSourceBrain/PospischilEtAl2008

Conversion to NeuroML of cell models from: *Minimal Hodgkin–Huxley type models for different classes of cortical and thalamic neurons*, Martin Pospischil, Maria Toledo-Rodriguez, Cyril Monier, Zuzanna Piwkowska, Thierry Bal, Yves Frégnac, Henry Markram and Alain Destexhe, Biological Cybernetics, 2008

Language: XSLT - Size: 1.77 MB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

JustasB/centeredstate.com

Language: HTML - Size: 539 KB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

JustasB/BlueBrainProjectShowcase Fork of OpenSourceBrain/BlueBrainProjectShowcase

A project to illustrate how models and data from the Blue Brain Project can be converted to NeuroML and PyNN

Language: AGS Script - Size: 11.1 MB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

JustasB/scidash.github.io Fork of scidash/scidash.github.io

Website for SciDash/SciUnit

Language: CSS - Size: 33.2 KB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

JustasB/cx3d-mvn Fork of tferr/cx3d-mvn

Mavenized version of Cx3D

Language: Java - Size: 2.79 MB - Last synced: about 1 year ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

JustasB/Thalamocortical Fork of OpenSourceBrain/Thalamocortical

GitHub repository for an OSB project containing a thalamocortical network model based on Traub et al. 2005

Language: XSLT - Size: 28.2 MB - Last synced: about 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

JustasB/neurogateway Fork of russelljjarvis/neurogateway

HPC Version of 3Drodent

Language: OpenEdge ABL - Size: 2.76 MB - Last synced: about 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

JustasB/sciunit Fork of scidash/sciunit

A Python framework for formal, data-driven validation of scientific models.

Language: Python - Size: 172 KB - Last synced: about 1 year ago - Pushed: almost 8 years ago - Stars: 0 - Forks: 0

JustasB/Mig3DTest

Language: OpenEdge ABL - Size: 67.9 MB - Last synced: about 1 year ago - Pushed: almost 8 years ago - Stars: 0 - Forks: 1

JustasB/osb-model-validation Fork of OpenSourceBrain/osb-model-validation

Tools for automated model validation in OpenSourceBrain projects

Language: Python - Size: 275 KB - Last synced: about 1 year ago - Pushed: over 8 years ago - Stars: 0 - Forks: 0

JustasB/ACnet2 Fork of OpenSourceBrain/ACnet2

Primary Auditory Cortex model by Dave Beeman

Language: XSLT - Size: 2.61 MB - Last synced: about 1 year ago - Pushed: almost 9 years ago - Stars: 0 - Forks: 0

JustasB/neuroml-db Fork of scrook/neuroml-db

database of neuroml models

Language: Ruby - Size: 95.6 MB - Last synced: about 1 year ago - Pushed: almost 9 years ago - Stars: 0 - Forks: 0

JustasB/redmine Fork of OpenSourceBrain/redmine

This is a customised version of redmine for the Open Source Brain website

Language: Ruby - Size: 35.3 MB - Last synced: about 1 year ago - Pushed: almost 9 years ago - Stars: 0 - Forks: 0

JustasB/PinskyRinzelModel Fork of OpenSourceBrain/PinskyRinzelModel

Reduced CA3 cell model from Pinsky & Rinzel 1994

Size: 3.13 MB - Last synced: about 1 year ago - Pushed: over 8 years ago - Stars: 0 - Forks: 0

JustasB/org.neuroml.export Fork of NeuroML/org.neuroml.export

Export from NeuroML & LEMS

Language: Java - Size: 3.06 MB - Last synced: about 1 year ago - Pushed: almost 9 years ago - Stars: 0 - Forks: 0