GitHub / Lattice-Automation 7 Repositories
We make software solutions that enable synthetic biology workflows, pipelines, and best practices.
Lattice-Automation/icor-codon-optimization
RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8
Language: Python - Size: 29.5 MB - Last synced at: 7 days ago - Pushed at: about 2 years ago - Stars: 66 - Forks: 13
Lattice-Automation/seqviz
a JavaScript DNA, RNA, and protein sequence viewer
Language: TypeScript - Size: 111 MB - Last synced at: 11 days ago - Pushed at: 4 months ago - Stars: 274 - Forks: 60
Lattice-Automation/synbio
a DNA assembly library
Language: Python - Size: 24.7 MB - Last synced at: 13 days ago - Pushed at: over 1 year ago - Stars: 22 - Forks: 2
Lattice-Automation/seqparse
Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format
Language: TypeScript - Size: 4.89 MB - Last synced at: 25 days ago - Pushed at: about 1 year ago - Stars: 16 - Forks: 4
Lattice-Automation/primers
A PCR primer tool for DNA assembly flows
Language: Python - Size: 70.3 KB - Last synced at: 28 days ago - Pushed at: about 1 year ago - Stars: 31 - Forks: 6
Lattice-Automation/repp Fork of jjti/repp
repository-based plasmid design
Language: Go - Size: 339 MB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 28 - Forks: 3
Lattice-Automation/seqfold
nucleic acid folding
Language: Python - Size: 136 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 79 - Forks: 12
Lattice-Automation/aws-codepipeline-jenkins-aws-codedeploy_linux Fork of awslabs/aws-codepipeline-jenkins-aws-codedeploy_linux 📦
Use this sample when creating a four-stage pipeline in AWS CodePipeline while following the Four Stage Pipeline Tutorial. http://docs.aws.amazon.com/codepipeline/latest/userguide/getting-started-4.html
Language: Ruby - Size: 137 KB - Last synced at: about 2 years ago - Pushed at: over 9 years ago - Stars: 0 - Forks: 0
Lattice-Automation/constellation-js Fork of hicsail/constellation-js
Library for combinatorially specifying, constraining, and exploring genetic design spaces.
Language: JavaScript - Size: 51 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 0