PalMuc/congeneric_synteny

analysis of synteny across animals

Language: Python - Size: 86 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

PalMuc/HaploTC

Target Capturing Genome-wide Loci in Marine Haplosclerids

Size: 1.43 GB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0

PalMuc/2Tethya_genomes

The genome of the contractile demosponge Tethya wilhelma

Language: HTML - Size: 471 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

PalMuc/beauty_in_the_beast

Language: Raku - Size: 14.8 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

PalMuc/Annotate-GFF

Add annotations to a GFF file

Language: Ruby - Size: 121 KB - Last synced at: 3 days ago - Pushed at: about 14 years ago - Stars: 3 - Forks: 1

PalMuc/CalciteSea

Data repository for Conci N., Griesshaber E., Rivera-Vicéns R., Schmahl W., Vargas S. and Wӧrheide G (2022) Molecular and mineral responses of corals grown under artificial Calcite Sea conditions.

Size: 83.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

PalMuc/TransPi_paper

TransPi - Supplementary files

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PalMuc/Spongillida_Minimalist_Barcodes

Repository for: Minimalist barcodes for sponges: a case study classifying African freshwater Spongillida. Authors: Dirk Erpenbeck, Markus Steiner, Astrid Schuster, Martin J. Genner, Renata Manconi, Roberto Pronzato, Bernhard Ruthensteiner, Didier van den Spiegel, Rob W.M. van Soest, and Gert Wörheide

Size: 7.81 KB - Last synced at: almost 2 years ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

PalMuc/Soft-Sponges-Tricky-Tree

Data sets of "Soft Sponges with Tricky Tree: On the Phylogeny of Dictyoceratid Sponges" by Erpenbeck D, Galitz A,Ekins M, Cook SdC, van Soest RWM, Hooper JNA, and Wörheide G. To be used under the Creative Commons CC-BY-NC-ND license, please with quotation of the paper.

Size: 32.2 KB - Last synced at: almost 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

PalMuc/PlasticsSponge

Sponges as bioindicators for microparticulate pollutants

Language: R - Size: 17.3 MB - Last synced at: almost 2 years ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 1

PalMuc/PlasticsBacteria

Language: R - Size: 18 MB - Last synced at: almost 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1

PalMuc/Montipora_digitata_resources

Companion repository for González-Pech et al.

Language: R - Size: 20.2 MB - Last synced at: almost 2 years ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 0

PalMuc/Molecular-biodiversity-of-Red-Sea-demosponges.

Data set repository of Erpenbeck et al. (2016), Marine Pollution Bulletin 105:507-515. To be used under the Creative Commons CC-BY-NC-ND license, please with quotation of the paper.

Size: 194 KB - Last synced at: almost 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

PalMuc/KeratoseMuseOMICS

Data for Agne et al. Keratose sponge MuseOMICS: setting reference points in dictyoceratid demosponge phylogeny

Size: 8.79 KB - Last synced at: almost 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

PalMuc/A-short-LSU-rRNA-fragment-as-a-standard-marker-for-integrative-taxonomy-in-calcareous-sponges

Alignment, secondary structure files, trees & more of Voigt & Wörheide (2016) Organisms Diversity & Evolution 16:53-64. To be used under the Creative Commons CC-BY-NC-ND license, please with quotation of the paper.

Size: 3.09 MB - Last synced at: almost 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

PalMuc/Aphrocallistes_vastus_genome

Aphrocallistes vastus genome

Language: Shell - Size: 711 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

PalMuc/TransPi

TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly

Language: Nextflow - Size: 48.6 MB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 24 - Forks: 14

PalMuc/SONNE_Hexactinellida

Size: 318 KB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

PalMuc/triangulation

Supplementary data and pipelines for analyzing genome gene content data and morphology to create various phylogenies.

Language: R - Size: 263 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 4 - Forks: 0

PalMuc/bio-phyta

Language: Ruby - Size: 1.1 MB - Last synced at: 3 days ago - Pushed at: over 13 years ago - Stars: 2 - Forks: 1

PalMuc/mitoclocks2018

Language: Roff - Size: 923 KB - Last synced at: almost 2 years ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 1

PalMuc/Kingdom-Assignment

A Ruby gem to parse BLASTplus XML output and annotate higher rank taxonomy

Language: Ruby - Size: 992 KB - Last synced at: 3 days ago - Pushed at: almost 14 years ago - Stars: 1 - Forks: 0

PalMuc/Kingdom-Splitter

A Ruby gem to sort out bacterial, archaeal and viral contaminations from genomic data.

Language: Ruby - Size: 102 KB - Last synced at: 3 days ago - Pushed at: over 14 years ago - Stars: 1 - Forks: 0

PalMuc/Kingdom-Extraction

Language: Ruby - Size: 97.7 KB - Last synced at: 3 days ago - Pushed at: over 14 years ago - Stars: 1 - Forks: 0