QIICR/dicom3tools 📦

This is an UN-OFFICIAL repository of the dicom3tools library by David Clunie. Official location: http://www.dclunie.com/dicom3tools/workinprogress/. Tags correspond to snapshots of the source code published at the original location.

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QIICR/dcmqi

dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results

Language: C++ - Size: 17.3 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 257 - Forks: 63

QIICR/QuantitativeReporting

Segmentation-based measurements with DICOM import and export of the results.

Language: Python - Size: 31.8 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 25 - Forks: 25

QIICR/dcmtk-dcmqi

This is a version of DCMTK that is customized for dcmqi CI (see dcmqi branch)

Language: C++ - Size: 31.8 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 3

QIICR/Slicer-PETDICOMExtension

3D Slicer extension containing tools for importing DICOM PET series

Language: C++ - Size: 274 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 18 - Forks: 12

QIICR/PET-IndiC

UIowa QIN PET volume indices measurement tool for 3D Slicer

Language: Python - Size: 279 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 2

QIICR/DICOM4QI

DICOM4QI is an open demonstration and connectathon with the purpose of promoting and improving the use of DICOM for exchanging the quantitative image analysis results

Size: 40.4 MB - Last synced at: 10 days ago - Pushed at: 10 months ago - Stars: 4 - Forks: 10

QIICR/pydcmqi

Easy access Python wrapper of the DCMQI library

Language: Python - Size: 27.3 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 0

QIICR/PETLiverUptakeMeasurement

3D Slicer Extension for measurement of liver uptake in PET scans

Language: C++ - Size: 142 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 1

QIICR/T1Mapping

T1 mapping estimates effective tissue parameter maps (T1) from multi-spectral FLASH MRI scans with different flip angles.

Language: C++ - Size: 32.2 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 2

QIICR/PETTumorSegmentation

3D Slicer Extension for PETTumorSegmentation

Language: C++ - Size: 315 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 14 - Forks: 10

QIICR/SlicerLayoutButtons

Language: Python - Size: 5.65 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 2

QIICR/TCIABrowser

3D Slicer module for browsing and downloading medical imaging collections from The Cancer Imaging Archive (TCIA).

Language: Python - Size: 6.41 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 15 - Forks: 9

QIICR/PkModeling Fork of millerjv/PkModeling

Slicer Extension providing pharmacokinetic modeling

Language: C++ - Size: 1.75 MB - Last synced at: 6 days ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 4

QIICR/DSC_Analysis

Analysis of Dynamic Susceptibility Contrast (DSC) MRI

Language: C++ - Size: 109 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 5

QIICR/SlicerDevelopmentToolbox

API for 3D Slicer extension development providing widgets, mixins, helpers, decorators etc.

Language: Python - Size: 1.98 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 7

QIICR/lidc2dicom

Scripts for converting TCIA LIDC-IDRI collection derived data into standard DICOM representation from project-specific XML format.

Language: Jupyter Notebook - Size: 2.43 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 22 - Forks: 12

QIICR/dcmqi-guide

Learning materials for https://github.com/qiicr/dcmqi

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QIICR/QIN-PROSTATE-Repeatability-Radiomics

Language: Jupyter Notebook - Size: 89.5 MB - Last synced at: 6 days ago - Pushed at: over 4 years ago - Stars: 15 - Forks: 11

QIICR/ProjectIssuesAndWiki 📦

Project to keep track of overall progress and milestones of QIICR

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QIICR/zlib-dcmqi Fork of commontk/zlib

This is a version of zlib that is customized for dcmqi CI (see dcmqi branch)

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QIICR/ITK-dcmqi

This is a customized version of ITK to support dcmqi CI. It was manually and ugly stripped down to reduce build time and make continuous integration feasible.

Language: C++ - Size: 175 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

QIICR/dicom4miccai-handson

Supporting materials for the MICCAI 2017 DICOM tutorial. See accompanying documentation at https://qiicr.gitbook.io/dicom4miccai-handson/

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QIICR/dcmheat

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QIICR/dicom4miccai-old

Web site content for MICCAI 2017 DICOM4MICCAI tutorial at http://qiicr.org/dicom4miccai/

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QIICR/Iowa2DICOM

Scripts used for conversion of the data for the PET/CT quantitative imaging biomarker development project by the Iowa site of NCI QIN.

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QIICR/dcm2tables

Language: Python - Size: 464 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 3

QIICR/atom-dicom-dump

Atom editor package for examining the content of DICOM files

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QIICR/qiicr.github.io

Web site for QIICR at http://qiicr.org

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QIICR/dsr2csv

XSLT transformation of DICOM SR TID 1500 measurments into CSV table

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QIICR/SlicerPETPhantomAnalysis

3D Slicer Extension for Analysis of Uniform Cylinder Phantom PET scans

Language: C++ - Size: 47.9 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 1

QIICR/LongitudinalPETCT Fork of paulcm/LongitudinalPETCT

Longitudinal PET/CT Analysis Module for Slicer 4

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QIICR/SlicerGCPSetup

Size: 23.4 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

QIICR/Slicer-SUVFactorCalculator

3D Slicer CLI module to calculate Standardized Uptake Value conversion factors from DICOM

Language: C++ - Size: 48.8 KB - Last synced at: over 1 year ago - Pushed at: about 9 years ago - Stars: 1 - Forks: 2

QIICR/dicom4miccai

Web site for the DICOM4MICCAI tutorial at the MICCAI conference (2017 and 2018)

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QIICR/SlicerOpenCV Fork of Slicer/SlicerOpenCV

Slicer Extension wrapping OpenCV

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QIICR/CI4CC-Spring2016-ASW

Web site for the Academic Technology Development in Cancer Research workshop at CI4CC Spring 2016 Symposium

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QIICR/pydicom Fork of pydicom/pydicom

Read, modify and write DICOM files with python code

Language: Python - Size: 16.9 MB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 1

QIICR/docker-dcmtk-cli

Repository to keep Dockerfiles for automated Docker builds of DCMTK

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QIICR/ci4cc-informatics-resources Fork of seandavi/ci4cc-informatics-resources

Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are developing.

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QIICR/ci-sandbox Fork of jcfr/ci-sandbox

My sandbox for experimenting with CI services

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QIICR/QuantitativeReporting-guide

Learning materials for https://github.com/QIICR/QuantitativeReporting

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QIICR/DICOMSearch Fork of pieper/DICOMSearch

A utility to create a searchable index of the DICOM standard into a searchable database with web app

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QIICR/dcmiodlang

dcmiodlang is the implementation of a custom DICOM information object definition language (IODL) and a compatible transformation language, the information object definition [transformation] skeleton language (IODSKEL).

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QIICR/dcmqi-faq

Frequently Asked Questions for http://github.com/qiicr/dcmqi

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QIICR/qiicr-chart Fork of pieper/qiicr-chart

experiments with charting of qiicr datasets

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QIICR/qiicr.github.io-legacy

Web page for QIICR

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QIICR/IowaHNClinicalDataDICOMSRConversion

XSLT scripts developed by David Clunie to enable conversion of tab-delimited text files into DICOM SR to support encoding of the Iowa QIICR use case

Language: XSLT - Size: 1.1 MB - Last synced at: over 1 year ago - Pushed at: almost 10 years ago - Stars: 0 - Forks: 0

QIICR/Slicer-QuantitativeIndicesExt

NOTICE! The Quantitative Indices Extension has moved to https://github.com/QIICR/PET-IndiC

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QIICR/ExtensionsIndex Fork of Slicer/ExtensionsIndex

Slicer extensions index

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QIICR/couchSite Fork of pieper/couchSite

Simple script to put html apps into a couchdb (even simpler than couchapp, which has been discontinued)

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QIICR/SR-sandbox

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QIICR/DICOMAnnotations

DICOMAnnotation extension for 3D Slicer.

Language: Python - Size: 270 KB - Last synced at: over 1 year ago - Pushed at: about 11 years ago - Stars: 1 - Forks: 0