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TC-Hewitt/Misc_NGS

various tools that help with deep sequencing analysis

Language: Python - Size: 54.7 KB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 0 - Forks: 0

TC-Hewitt/OatCrownRust

Custom scripts and workflows used in the genomics and population analysis of oat crown rust (Puccinia coronata f. sp. avenae) paper (<DOI TBA>). All steps performed in Linux environment or R.

Language: Python - Size: 313 KB - Last synced: 9 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

TC-Hewitt/MuTrigo

pipeline for mutant gene candidate discovery

Language: Python - Size: 81.1 KB - Last synced: 9 months ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 0

TC-Hewitt/Axminster7A

Scripts and code used in the Pm1/AvrPm1 cloning paper ( https://doi.org/10.1111/nph.17075) for analysis of chromosome 7A from bread wheat cultivar Axminster. All commands and programs run in Linux environment.

Language: Python - Size: 30.3 KB - Last synced: 9 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0