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GitHub / TissueImageAnalytics 4 repositories

From tissue images to insights

TissueImageAnalytics/tiatoolbox

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

Language: Python - Size: 524 MB - Last synced: 3 days ago - Pushed: 5 days ago - Stars: 330 - Forks: 71

TissueImageAnalytics/cerberus

One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification

Language: Python - Size: 214 KB - Last synced: 4 days ago - Pushed: 3 months ago - Stars: 62 - Forks: 11

TissueImageAnalytics/CoNIC

CoNIC Challenge

Language: Jupyter Notebook - Size: 6.93 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 54 - Forks: 20

TissueImageAnalytics/cytomine-hovernet

Implementaiton of TIAToolbox's HoVer-Net in Cytomine

Language: Python - Size: 12.7 KB - Last synced: 6 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 0

TissueImageAnalytics/BRACE-marker

Tumour Grade Composition Index

Language: Python - Size: 822 KB - Last synced: 9 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

TissueImageAnalytics/iguana

Interpretable Gland-Graph Networks

Language: Python - Size: 403 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 6 - Forks: 0

TissueImageAnalytics/ExtractPatchesFromAnnotatedRegions

This pipeline will extract the annotated regions of WSI annotated by ASAP software based on the inputs such as patch size and resolution

Language: Python - Size: 4.88 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 2 - Forks: 1

TissueImageAnalytics/PanNuke-metrics 📦

Evaluation code for the PanNuke dataset

Language: Python - Size: 22.5 KB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 11 - Forks: 5

TissueImageAnalytics/tiatoolbox-docker

Docker Official Image packaging for Tiatoolbox

Language: Dockerfile - Size: 61.5 KB - Last synced: 6 months ago - Pushed: about 1 year ago - Stars: 1 - Forks: 0

TissueImageAnalytics/TILAb-Score

This repository contains the implementation of TILAb-score as described in the original paper.

Language: Python - Size: 13.4 MB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 15 - Forks: 2

TissueImageAnalytics/TIAMultiProc

Language: Python - Size: 16.6 KB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0

TissueImageAnalytics/tiatoolbox-feedstock Fork of conda-forge/tiatoolbox-feedstock

A conda-smithy repository for tiatoolbox.

Size: 21.5 KB - Last synced: about 1 year ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

TissueImageAnalytics/staged-recipes Fork of conda-forge/staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

Size: 66.3 MB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

TissueImageAnalytics/pathcomp

Language: JavaScript - Size: 171 MB - Last synced: about 1 year ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

TissueImageAnalytics/hover_net Fork of vqdang/hover_net

Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.

Language: Python - Size: 26.1 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 3 - Forks: 4

TissueImageAnalytics/Context-Aware-CNN

Context-Aware Convolutional Neural Network for Histology Images

Size: 2.26 MB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 7 - Forks: 1