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GitHub / abhijeetsingh1704 42 Repositories

PostDoc Researcher @AMB_SLU https://twitter.com/abhijeet214

abhijeetsingh1704/Color_palette_30

Size: 54.7 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

abhijeetsingh1704/quast Fork of ablab/quast

Genome assembly evaluation tool

Size: 580 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

abhijeetsingh1704/REDigest

REDigest: a Python GUI for In-Silico Restriction Digestion Analysis for Gene or Complete Genome Sequences

Language: Python - Size: 347 KB - Last synced at: 4 months ago - Pushed at: 5 months ago - Stars: 2 - Forks: 3

abhijeetsingh1704/DupRemover

Removes duplicate sequences in multifasta file

Language: Python - Size: 49.8 KB - Last synced at: 4 months ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 3

abhijeetsingh1704/CCS_reality_check

The case for a targeted use of Carbon Capture and Storage (CCS)

Size: 389 KB - Last synced at: 4 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

abhijeetsingh1704/CharReplace

CharReplace: a multipurpose program to replace special characters in file/directories names or rename files/directories

Language: Python - Size: 30.3 KB - Last synced at: 20 days ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 0

abhijeetsingh1704/phylogenomics2019

Language: HTML - Size: 670 MB - Last synced at: 4 months ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0

abhijeetsingh1704/clean_DNA_fasta

Program to clean DNA fasta sequences

Language: Shell - Size: 18.6 KB - Last synced at: 4 months ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 1

abhijeetsingh1704/AcetoScan

AcetoScan - Automated pipeline for the unsupervised analysis of FTHFS amplicon sequencing

Language: Shell - Size: 46.1 MB - Last synced at: 4 months ago - Pushed at: almost 4 years ago - Stars: 4 - Forks: 3

abhijeetsingh1704/SPOB_SAOB_HM_MAGs

Multiple syntrophic associations in ammonia tolerance-niched propionate degradation at thermophilic conditions

Size: 59.7 MB - Last synced at: 4 months ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/fastA2Q

simple and convenient program to convert fasta sequences to fastq sequences

Language: Shell - Size: 42 KB - Last synced at: 23 days ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 1

abhijeetsingh1704/Awesome-Bioinformatics Fork of danielecook/Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

Size: 281 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/DNA-to-BINARY

Bash program for DNA sequence to binary format translation

Language: Shell - Size: 21.5 KB - Last synced at: 4 months ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 3

abhijeetsingh1704/abhijeetsingh1704

Config files for my GitHub profile.

Size: 1000 Bytes - Last synced at: 4 months ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/googerteller Fork of berthubert/googerteller

audible feedback on just how much your browsing feeds into google

Size: 176 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/PROTEINcleaner

a python utility to clean PROTEIN sequences and headers

Language: Python - Size: 6.84 KB - Last synced at: 4 months ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 0

abhijeetsingh1704/PlantsAndPython Fork of PlantsAndPython/PlantsAndPython

Size: 94.5 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/MOAB_private

Size: 882 MB - Last synced at: 10 days ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/SubsetSeq

a python utility to subset multisequence file based on identifiers from external text file

Language: Python - Size: 34.2 KB - Last synced at: 4 months ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/DNAcleaner

a python utility to clean DNA sequences and headers

Language: Python - Size: 10.7 KB - Last synced at: about 2 months ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/r4ds Fork of ReeceGoding/r4ds

R for data science: a book

Size: 42.5 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/OrthoFinder Fork of davidemms/OrthoFinder

Phylogenetic orthology inference for comparative genomics

Size: 43.3 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/bbbin Fork of wwood/bbbin

A collection of working and non-working bioinformatics scripts

Size: 7.85 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/clean_AMINOACID_fasta

Program to clean AMINO ACID fasta sequences

Language: Shell - Size: 21.5 KB - Last synced at: 4 months ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/FilterByLength

Filter fasta sequences by length

Language: Python - Size: 53.7 KB - Last synced at: 4 months ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/enrichM Fork of geronimp/enrichM

Toolbox for comparative genomics of MAGs

Size: 32.6 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/plotTree Fork of katholt/plotTree

Size: 29.6 MB - Last synced at: about 2 years ago - Pushed at: about 9 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/Complete-Python-3-Bootcamp Fork of Pierian-Data/Complete-Python-3-Bootcamp

Course Files for Complete Python 3 Bootcamp Course on Udemy

Size: 35.4 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/introduction-to-bash-scripting Fork of bobbyiliev/introduction-to-bash-scripting

Free Introduction to Bash Scripting eBook

Size: 1.42 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/MyONT

Language: Java - Size: 6.94 MB - Last synced at: 4 months ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0

abhijeetsingh1704/nanopore_sync_away Fork of replikation/nanopore_sync_away

easy file transfer of fast5 while running a sequencing run

Size: 14.6 KB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0

abhijeetsingh1704/ML

Size: 2.93 KB - Last synced at: 14 days ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/matplotlib_info

supp info for matplotlib

Size: 1.95 KB - Last synced at: 4 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/BioinfoResource

BioinfoResource

Size: 0 Bytes - Last synced at: 4 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/WebScrapping_learning

Language: Python - Size: 51.6 MB - Last synced at: 4 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 1

abhijeetsingh1704/cellphy Fork of amkozlov/cellphy

CellPhy: accurate and fast probabilistic inference of single-cell phylogenies

Size: 23.1 MB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/MyJulia_learning

Language: Jupyter Notebook - Size: 30.5 MB - Last synced at: 4 months ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/amplibase

A docker image with tools installed for amplicon sequence analysis

Size: 4.88 KB - Last synced at: 4 months ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/Weighted_Unifrac_PCoA

R script for Principal co-ordinate analysis with weighted unifrac distance in phyloseq visualization pipeline

Language: R - Size: 22.5 KB - Last synced at: 8 days ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1

abhijeetsingh1704/moritzbuck.github.io Fork of moritzbuck/moritzbuck.github.io

Size: 7.01 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/ATP_for_peptide

This programs calculates the approximate energy (ATP) required to form a peptide chain

Language: Shell - Size: 26.4 KB - Last synced at: about 2 months ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/vacuole-analysis Fork of jonasoh/AuTToFlux

Pipeline for high-throughput analysis of RFP/GFP ratios in vacuoles

Language: R - Size: 24.4 KB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/CONCAT

Convert sequences in multifasta file to a single sequence with new fasta header

Language: Shell - Size: 21.5 KB - Last synced at: 4 months ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

abhijeetsingh1704/BINARY_to_DNA

The script translates the binary codes to DNA bases

Language: Shell - Size: 16.6 KB - Last synced at: 4 months ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 2

abhijeetsingh1704/SUPER-FOCUS Fork of metageni/SUPER-FOCUS

A tool for agile functional analysis of shotgun metagenomic data

Language: Python - Size: 15.6 MB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0