afmagee/afmagee.github.io

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afmagee/treess

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afmagee/rooted_treess_simulation_study

Adapting https://bitbucket.org/afmagee/tree_convergence_code for rooted trees from posterior samples

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afmagee/stoch_mod_journal_club Fork of vnminin/stoch_mod_journal_club

Stochastic modeling journal club at UCI Statistics

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afmagee/revbayes Fork of revbayes/revbayes.archive

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afmagee/phyml Fork of stephaneguindon/phyml

PhyML -- Phylogenetic estimation using (Maximum) Likelihood

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afmagee/GRFP Fork of ybrandvain/GRFP

Here are a set of example Relevant Background and Future Goals and Graduate Research Plan Statement statements for the NSF GRFP in Ecology and Evolutionary Biology.

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afmagee/BIOL_481_W2018

For code used in BIOL 481 dry labs

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afmagee/beagle-lib Fork of beagle-dev/beagle-lib

general purpose library for evaluating the likelihood of sequence evolution on trees

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afmagee/CRABS

An R package for visualizing congruence classes.

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afmagee/gefbd

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afmagee/hsmrfbdp

Code for our work developing and characterizing the HSMRF priors for birth-death processes.

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