aramis-lab/clinica

Software platform for clinical neuroimaging studies

Language: Python - Size: 33.9 MB - Last synced: 4 days ago - Pushed: 4 days ago - Stars: 216 - Forks: 71

aramis-lab/clinicadl

Framework for the reproducible processing of neuroimaging data with deep learning methods

Language: Python - Size: 9.73 MB - Last synced: 4 days ago - Pushed: 4 days ago - Stars: 152 - Forks: 52

aramis-lab/clinica-pydra-fsl

Pydra tasks for FSL designed for Clinica

Language: Python - Size: 239 KB - Last synced: 25 days ago - Pushed: 27 days ago - Stars: 3 - Forks: 1

aramis-lab/clinica-pydra-petpvc

Pydra tasks for PETPVC designed for Clinica

Language: Python - Size: 32.2 KB - Last synced: 26 days ago - Pushed: 27 days ago - Stars: 0 - Forks: 0

aramis-lab/clinica-pydra-freesurfer

Pydra tasks for FreeSurfer designed for Clinica

Language: Python - Size: 299 KB - Last synced: 9 days ago - Pushed: 27 days ago - Stars: 5 - Forks: 1

aramis-lab/pydra-dcm2bids 📦

Pydra tasks for dcm2bids

Language: Python - Size: 48.8 KB - Last synced: 25 days ago - Pushed: about 2 months ago - Stars: 1 - Forks: 0

aramis-lab/clinica-pydra-ants

Pydra tasks for ANTs designed for Clinica

Language: Python - Size: 58.6 KB - Last synced: 10 days ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0

aramis-lab/pydra-spm

Pydra tasks for SPM

Language: Python - Size: 91.8 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 2

aramis-lab/pydra-bids

Pydra tasks for BIDS I/O

Language: Python - Size: 208 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 2 - Forks: 1

aramis-lab/pydra-brainstat

Pydra tasks for BrainStat

Language: Python - Size: 214 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 1

aramis-lab/miccai2022-stratifiad

Language: Python - Size: 348 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 3 - Forks: 1

aramis-lab/AD-ML

Framework for the reproducible classification of Alzheimer's disease using machine learning

Language: Python - Size: 3.3 MB - Last synced: 2 months ago - Pushed: almost 2 years ago - Stars: 38 - Forks: 15

aramis-lab/hiplay7-thickness

Language: MATLAB - Size: 554 KB - Last synced: 5 months ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 0

aramis-lab/hiplay7-recombine

Language: Python - Size: 192 KB - Last synced: 5 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 1

aramis-lab/MICCAI-educational-challenge-2020

AD Classification using Clinica

Size: 182 KB - Last synced: 5 months ago - Pushed: over 2 years ago - Stars: 4 - Forks: 2

aramis-lab/NOW-2023

Repository for the 2023 NeuroScience Open Workshop

Language: Jupyter Notebook - Size: 4.12 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 1 - Forks: 0

aramis-lab/NOW-2023-lib

Library to be used for NOW 2023 workshop

Language: Python - Size: 132 KB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

aramis-lab/DL4MI

Workshop Deep Learning for Medical Imaging

Language: Jupyter Notebook - Size: 807 KB - Last synced: 5 months ago - Pushed: over 2 years ago - Stars: 6 - Forks: 8

aramis-lab/dataset-registry

Public dataset registry for dvc

Size: 5.86 KB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

aramis-lab/clinicadl-pythae

Language: Python - Size: 101 KB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 0

aramis-lab/RSECon23-Pydra

Language: Jupyter Notebook - Size: 1010 KB - Last synced: 9 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

aramis-lab/pydra-tasks-ants

Pydra tasks for ANTs

Language: Python - Size: 12.7 KB - Last synced: 10 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

aramis-lab/idhm2022-pydra-demo

Language: Jupyter Notebook - Size: 55.7 KB - Last synced: 10 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

aramis-lab/idhm2022-bids-primer

Size: 2.55 MB - Last synced: 10 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

aramis-lab/handbook

The Aramis Lab Handbook

Language: Makefile - Size: 4.31 MB - Last synced: 10 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 3

aramis-lab/clinicadl_handbook

Tutorial to use (new version of) clinicadl (>1.0.3)

Language: Jupyter Notebook - Size: 5.86 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 6

aramis-lab/clinicadl_bis Fork of aramis-lab/clinicadl

Framework for the reproducible processing of neuroimaging data with deep learning methods

Size: 8.23 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

aramis-lab/clinica_pipeline_noddi 📦

NODDI pipeline used for [Wen et al., 2018]

Language: Python - Size: 31.3 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

aramis-lab/clinica_pipeline_fmri_preprocessing 📦

fMRI-Preprocessing pipeline used for [Guillon et al., 2019]

Language: Python - Size: 23.4 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 1 - Forks: 0

aramis-lab/AD-DL 📦

Classification of Alzheimer's disease status with convolutional neural networks.

Language: Python - Size: 6.02 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 33 - Forks: 8

aramis-lab/Notebooks-AD-DL

Notebooks for classification of Alzheimer's disease using deep learning

Language: Jupyter Notebook - Size: 8.41 MB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 4 - Forks: 1

aramis-lab/axial-mlp

Implementation of Axial-MLP in PyTorch

Language: Python - Size: 3.91 KB - Last synced: 12 months ago - Pushed: over 2 years ago - Stars: 2 - Forks: 1

aramis-lab/pac2019

PAC 2019 challenge: predict a subject's age from it's brain MR Image

Language: Python - Size: 19.7 MB - Last synced: 10 months ago - Pushed: over 4 years ago - Stars: 4 - Forks: 4

aramis-lab/histo_mri

Code for assessing the possibility to detect neurofibrilary tangles in MR images of mouse brains using histological cuts and deep learning

Language: Python - Size: 71.3 KB - Last synced: 7 months ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0