bioShaun/omsCMplot

CMplot adapted from YinLiLin/R-CMplot

Language: R - Size: 18.6 KB - Last synced: 7 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 1

bioShaun/wheatgmap

Language: JavaScript - Size: 32.2 MB - Last synced: 7 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

bioShaun/Hosts Fork of phobal/Hosts

:bowtie:无障碍上网-你~懂得！[更新频率7d，需要请 fork]

Size: 647 KB - Last synced: about 1 year ago - Pushed: over 8 years ago - Stars: 0 - Forks: 1

bioShaun/omRnaseq-nf

a rnaseq pipeline based on nextflow

Language: R - Size: 51.8 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 1

bioShaun/om-nf-rnaseq

Language: Python - Size: 471 KB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0

bioShaun/omplotr

store plot functions & themes for onmath projects

Language: R - Size: 2.29 MB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 1 - Forks: 1

bioShaun/ng10-course Fork of lycHub/ng10-course

angular9-10 教程

Size: 4.83 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

bioShaun/omSnpScore

snp score for selected region finding

Language: Python - Size: 473 KB - Last synced: 6 days ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

bioShaun/nf-reseq-om

om reseq workflow based on nextflow

Language: CSS - Size: 2.54 MB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 1

bioShaun/OMrnaseq

a new rnaseq package

Language: Python - Size: 20.4 MB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 1

bioShaun/qc_report_v1

generate qc report for FastQC results

Language: Python - Size: 6.16 MB - Last synced: about 1 year ago - Pushed: about 3 years ago - Stars: 1 - Forks: 0

bioShaun/angular-tutorial

Language: TypeScript - Size: 435 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

bioShaun/now-github-starter Fork of CodeBrew28/now-github-starter

Starter project to demonstrate a project whose pull requests get automatically deployed

Language: HTML - Size: 13.7 KB - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

bioShaun/vue-admin-template

Language: Vue - Size: 445 KB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

bioShaun/QTLseqr Fork of bmansfeld/QTLseqr

QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis

Language: R - Size: 25.6 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

bioShaun/web-test-wzry

wzry website test

Language: JavaScript - Size: 4.05 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

bioShaun/UpSetR Fork of hms-dbmi/UpSetR

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

Language: R - Size: 30 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

bioShaun/web_project

学习建站

Size: 1.95 KB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

bioShaun/omsCabinet

脚本存放，归档

Language: Python - Size: 407 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

bioShaun/om-nf-prepare

A reseq reference prepare pipeline based on nextflow

Language: Nextflow - Size: 8.79 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/omRNAutils

A package for oms RNAseq analysis

Size: 0 Bytes - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

bioShaun/you-get Fork of soimort/you-get

:arrow_double_down: Dumb downloader that scrapes the web

Size: 3.08 MB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

bioShaun/myNote

an org-mode notebook to record my Q&As

Size: 322 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

bioShaun/wheatdbwebsite

wheat expression database website

Size: 0 Bytes - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

bioShaun/learn-django

learn-django

Language: Python - Size: 183 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

bioShaun/omsTools

a collection of scripts for NGS (mainly for RNAseq) analysis

Language: Python - Size: 119 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 1

bioShaun/MultiQC-oms

a MultiQC plugin for OMS

Language: Python - Size: 54.7 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

bioShaun/MultiQC Fork of ewels/MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report.

Language: Python - Size: 20.6 MB - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

bioShaun/omdetector

blast unmapped reads(fasta format) to swiss/uniref database and calculate the portion of reads hit on each species

Language: Nextflow - Size: 1.95 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

bioShaun/omUtils

collected frequently used python function and class

Language: Python - Size: 1.95 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

bioShaun/omWheatGeneEnrich

run KOBAS using wheat gene list

Language: Python - Size: 14.6 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

bioShaun/omReseq-nf

Onmath reseq pipeline based on nextflow

Language: CSS - Size: 1.31 MB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

bioShaun/py2report Fork of jamebluntcc/py2report

generate latex&html report by python

Language: CSS - Size: 2.01 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/pipe_v1.1

pipe and other scripts

Language: Python - Size: 737 KB - Last synced: about 1 year ago - Pushed: about 7 years ago - Stars: 2 - Forks: 2

bioShaun/nfRnaReport

generate analysis report for nextflow rnaseq pipeline

Language: CSS - Size: 3.31 MB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 0 - Forks: 1

bioShaun/xms-rnaseq-nf

A kallisto quantification pipeline based on nextflow

Language: Nextflow - Size: 3.91 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/pig_atlas_project

store scripts for pig atlas project

Language: Python - Size: 38.1 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/ensembldb

a python script to build local ensembl database

Language: Python - Size: 25.4 KB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

bioShaun/slurmpy Fork of brentp/slurmpy

submit jobs to slurm with quick-and-dirty python

Language: Python - Size: 13.7 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/rnaReport

script to generate rnaseq report

Language: CSS - Size: 1.5 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/RplotRoom

a place to store my R plot scripts

Language: R - Size: 7.29 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/reaflow

RNAseq expression analysis workflow library

Language: Python - Size: 19.5 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/summer

R package with functions for plot and data clean in 2018 summer

Language: R - Size: 5.86 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/notebook

A notebook to record something

Language: Python - Size: 11.7 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

bioShaun/fluent_python_note

note of fluent python

Size: 0 Bytes - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

bioShaun/myEmacs

my emacs config

Language: Emacs Lisp - Size: 1.95 KB - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

bioShaun/UbuntuSetup

record for my ubuntu tour

Language: Shell - Size: 20.2 MB - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

bioShaun/omsDoc

Document for different analysis

Language: TeX - Size: 66.4 KB - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

bioShaun/bioShaun.github.io

Language: HTML - Size: 1.14 MB - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

bioShaun/testRpackage

R package for practice

Language: R - Size: 1000 Bytes - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

bioShaun/omsTricks

Simple command line for bioinformatics.

Size: 2.93 KB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

bioShaun/PigProject

script for analysis pig project

Language: Shell - Size: 13.7 KB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

bioShaun/OMdatabase

Command line tool for prepare database for NGS analysis

Language: Python - Size: 119 KB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

bioShaun/TiebaScrawler

Web Scrawler for Scraping Baidu Tieba data

Size: 432 KB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

bioShaun/for_sublime3

sublime3 user settings and maybe other things

Size: 0 Bytes - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

bioShaun/RNAseq

RNAseq scrips

Language: Python - Size: 266 KB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 2

bioShaun/webcrawler

webcrawler for fun

Language: Python - Size: 41 KB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

bioShaun/pipe_v1

my project pipe and scripts

Size: 0 Bytes - Last synced: about 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0