canlab/CanlabCore

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

Language: MATLAB - Size: 956 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 152 - Forks: 86

canlab/WASABI_public

Public repository for the Warmth, Anticipation, Sensation, Aversion, and Body-part Imaging Study (WASABI)

Language: Python - Size: 2.06 GB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 2 - Forks: 1

canlab/canlab.github.io

Language: HTML - Size: 192 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 3 - Forks: 0

canlab/CANlab_help_examples

How-to examples and a batch pipeline for second-level neuroimaging analysis. Batch scripts and examples publish HTML files with code and output.

Language: HTML - Size: 122 MB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 27 - Forks: 11

canlab/FMRI_simulations

Language: HTML - Size: 170 MB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 9 - Forks: 5

canlab/MediationToolbox

Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mapping of mediation effects across the brain) and multivariate mediation.

Language: HTML - Size: 101 MB - Last synced at: 27 days ago - Pushed at: 27 days ago - Stars: 86 - Forks: 30

canlab/canlab_single_trials

A repository and data interface for MVPA education and model/algorithm development

Language: MATLAB - Size: 1.16 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 2

canlab/stimMAP_2022_public

Language: MATLAB - Size: 15.1 MB - Last synced at: 7 days ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 1

canlab/CanlabScripts

A compilation of useful scripts commonly used in canlab

Language: Jupyter Notebook - Size: 241 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 6 - Forks: 4

canlab/RobustToolbox

Robust regression toolbox for neuroimaging data

Language: HTML - Size: 44.8 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 14 - Forks: 7

canlab/Neuroimaging_Pattern_Masks

Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.

Language: HTML - Size: 7.73 GB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 105 - Forks: 45

canlab/ooFmriDataObjML

Object oriented ML framework for fmri_data objects

Language: MATLAB - Size: 3.57 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 1 - Forks: 0

canlab/cognitive_regulation_physiology

Data and scripts for Matthewson, Woo, & Wager (in prep)

Language: HTML - Size: 168 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 3 - Forks: 2

canlab/wagerlabtools_supplement Fork of wanirepo/wagerlabtools_supplement

The matlab functions that wani is working on, but not on the wagerlab repository

Language: Matlab - Size: 13 MB - Last synced at: about 1 year ago - Pushed at: almost 9 years ago - Stars: 1 - Forks: 1

canlab/stimMAP_public

A Public repo for the STIMmap Study in the CANlab

Size: 0 Bytes - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

canlab/spm8

Version of SPM8 with the Canlab's internal modifications

Language: Matlab - Size: 82.8 MB - Last synced at: about 1 year ago - Pushed at: almost 8 years ago - Stars: 3 - Forks: 4

canlab/preprocess

All of the preprocessing code

Language: MATLAB - Size: 208 MB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 5 - Forks: 4

canlab/redcap Fork of peterclark/redcap

A Ruby gem for interacting with the REDCap API

Language: Ruby - Size: 30.3 KB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

canlab/slurminator

A python script to generate and submit Slurm jobs

Language: Python - Size: 5.86 KB - Last synced at: about 1 year ago - Pushed at: almost 9 years ago - Stars: 0 - Forks: 2

canlab/mturk_walkthrough

Tutorial on how to build, implement, and launch an online experiments via jsPsych, psiTurk, and Heroku.

Language: Jupyter Notebook - Size: 1.59 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 1

canlab/PainGen_DR

behavioral data for PainGen

Size: 321 KB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1

canlab/r21_analysis

A collection of code for the r21stress project

Language: Matlab - Size: 6.13 MB - Last synced at: about 1 year ago - Pushed at: almost 8 years ago - Stars: 0 - Forks: 1

canlab/pain_biotyping

Language: Matlab - Size: 37.1 KB - Last synced at: about 1 year ago - Pushed at: almost 7 years ago - Stars: 1 - Forks: 0

canlab/jsPsych Fork of jspsych/jsPsych

A JavaScript library for creating and running behavioral experiments in a web browser

Language: JavaScript - Size: 9.2 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 2

canlab/expfactory-robots Fork of expfactory/expfactory-robots

robots for experiment factory experiments and surveys

Language: Python - Size: 5.65 MB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

canlab/expfactory-games Fork of expfactory/expfactory-games

Language: JavaScript - Size: 3.2 MB - Last synced at: about 1 year ago - Pushed at: over 8 years ago - Stars: 0 - Forks: 0

canlab/IMENSA_public

Language: Python - Size: 94.7 KB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

canlab/expfactory-experiments Fork of expfactory/expfactory-experiments

version 1.0 javascript experiments that can be deployed to run in an experiment infrastructure

Language: JavaScript - Size: 88.6 MB - Last synced at: about 1 year ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 2

canlab/expfactory-surveys Fork of expfactory/expfactory-surveys

experiment factory surveys

Language: CSS - Size: 256 KB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

canlab/CU-Boulder-Chronic-Back-Pain-Study

Language: HTML - Size: 43.9 KB - Last synced at: about 1 year ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0

canlab/expfactory-docker Fork of expfactory/expfactory-docker

container for deploying behavioral psychology experiments

Language: Python - Size: 1.48 MB - Last synced at: about 1 year ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0

canlab/expfactory-builder Fork of expfactory/expfactory-builder

builder images to generate experiment factory containers

Size: 6.84 KB - Last synced at: about 1 year ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0

canlab/experiments Fork of expfactory/experiments

library of version controlled, tested experiments for expfactory

Language: Python - Size: 402 KB - Last synced at: about 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 1

canlab/EPrimeLabJack Fork of GordonMatthewson/EPrimeLabJack

E-Basic function to integrate a Labjack USB I/O device with E-Prime 2.0

Size: 10.7 MB - Last synced at: about 1 year ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 3

canlab/expfactory Fork of expfactory/expfactory

software to generate a reproducible container with a battery of experiments

Language: Python - Size: 2.26 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 1

canlab/CANlab_data_public

Public repository for shared CANlab datasets (behavioral, physio)

Size: 11.7 KB - Last synced at: about 1 year ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 2

canlab/builder Fork of expfactory/builder

complete build, test and deploy pipeline template for generating an experiment container

Size: 4.89 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 1

canlab/canlab.github.io-canlab_help_examples Fork of academicpages/academicpages.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

Language: JavaScript - Size: 48.1 MB - Last synced at: about 1 year ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 2

canlab/bidskit Fork of jmtyszka/bidskit

Utility functions for working with DICOM and BIDS neuroimaging data

Language: Python - Size: 170 KB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 0

canlab/Apkarian_lab_Kd_analysis_ablm

Wager lab fork of the Apkarian group's ABLM toolbox.

Language: C - Size: 46.9 KB - Last synced at: about 1 year ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0

canlab/2022_Graul_intracranial_affect Fork of ben-g-1/2022_Graul_Bujarski_intracranial_affect

Scripts for iEEG preprocessing, data cleaning, running tasks, and analysis

Language: HTML - Size: 137 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

canlab/Attenuating_neural_threat_expression_with_imagination_2018

data to accompany neuron publication Attenuating neural threat expression with imagination (2018)

Language: Matlab - Size: 27.3 KB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 1

canlab/2021_Koban_NRN_SelfInContext

Language: MATLAB - Size: 317 KB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 1

canlab/2021_Ceko_MPA2_Aversive

Language: MATLAB - Size: 6.98 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 1

canlab/2020_Visceral_and_Somatic_Pain

Code used in Van Oudenhove, Kragel, et al. 2020

Language: MATLAB - Size: 47.9 KB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 0

canlab/2017_kragel_mfc_generalizability_natneurosci

MATLAB code for identifying generalizable brain representations of pain, cognitive control, and negative emotion

Language: Matlab - Size: 81.1 KB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 3 - Forks: 1

canlab/Lindquist_Dynamic_Correlation

Martin Lindquist's dynamic correlation toolboxes. Designed for fMRI analysis, useful for other applications too.

Language: HTML - Size: 2.18 MB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 33 - Forks: 16

canlab/Canlab_MKDA_MetaAnalysis

Coordinate-based meta-analysis for neuroimaging using Multilevel Kernel Density Analysis and various other statistical tools (chi-square, clustering, correspondence analysis, parcellation)

Language: MATLAB - Size: 13.6 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 18 - Forks: 9

canlab/CANLab_PsychoPy_Toolbox

Ease of use PsychoPy Wrappers for efficient creation of CANLab stimulus paradigms in the fMRI scanner

Language: Python - Size: 681 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 3

canlab/spm12

Language: Matlab - Size: 89.6 MB - Last synced at: about 1 year ago - Pushed at: almost 8 years ago - Stars: 6 - Forks: 5

canlab/spacetop-prep Fork of spatialtopology/spacetop-prep

code for transferring data and preprocessing

Size: 7.41 MB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

canlab/Paradigms_Public

Publicly available canlab experimental paradigms

Language: JavaScript - Size: 830 MB - Last synced at: 12 months ago - Pushed at: almost 2 years ago - Stars: 5 - Forks: 5

canlab/OASIS

Size: 80.1 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

canlab/git-slurm 📦

A tutorial for git and slurm

Language: Shell - Size: 25.4 KB - Last synced at: 12 months ago - Pushed at: over 8 years ago - Stars: 0 - Forks: 0

canlab/WAViMedEEG

Language: Jupyter Notebook - Size: 144 MB - Last synced at: 22 days ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 1

canlab/.github

Public-facing description of full CANlab organization GitHub

Size: 2.93 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

canlab/ANiC.github.io

Affective Neuroimaging Collaboratory

Language: MATLAB - Size: 293 MB - Last synced at: 3 months ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

canlab/petre_scope_of_pain_representation

Size: 3.73 MB - Last synced at: about 1 year ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

canlab/MJOLNIR_public

Moral Judgments Online: Learning Noceboes for Infectious Risk - An mTurk study on beliefs about COVID-19 risk

Language: HTML - Size: 451 MB - Last synced at: 12 months ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1

canlab/ComBatHarmonization Fork of Jfortin1/ComBatHarmonization

Harmonization of multi-site imaging data with ComBat

Language: R - Size: 4.74 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

canlab/TensorflowWalkthrough

Language: Jupyter Notebook - Size: 542 KB - Last synced at: 12 months ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1

canlab/histamine

Size: 0 Bytes - Last synced at: 12 months ago - Pushed at: almost 6 years ago - Stars: 0 - Forks: 0

canlab/cantainer

Containerizing the Canlab code

Size: 12.7 KB - Last synced at: about 1 year ago - Pushed at: almost 7 years ago - Stars: 3 - Forks: 0

canlab/spm_auto_reorient Fork of CyclotronResearchCentre/spm_auto_reorient

A few routines to perform "auto reorient" in SPM

Language: Matlab - Size: 0 Bytes - Last synced at: about 1 year ago - Pushed at: over 9 years ago - Stars: 0 - Forks: 1