charite/jannovar

Annotation of VCF variants with functional impact and from databases (executable+library)

Language: Java - Size: 23.6 MB - Last synced: 6 days ago - Pushed: 6 days ago - Stars: 54 - Forks: 38

charite/ngspipeline

Our NGS Pipeline using Nextflow

Size: 120 KB - Last synced: about 1 month ago - Pushed: over 9 years ago - Stars: 7 - Forks: 3

charite/denovocaller

Denovo Variation Caller for simple familie trios (mother, father, affected child)

Language: Java - Size: 137 KB - Last synced: about 1 month ago - Pushed: over 9 years ago - Stars: 2 - Forks: 0

charite/hyperSMURF-tutorial Fork of visze/hyperSMURF-tutorial

Tutorial how you can the hyperSMURF algorithm in your Java application

Language: Java - Size: 10.7 MB - Last synced: about 1 month ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

charite/topodombar

Phenotypic analysis of microdeletions and toplogical chromosome domain boundaries

Language: Python - Size: 92.3 MB - Last synced: about 1 month ago - Pushed: over 6 years ago - Stars: 1 - Forks: 4

charite/hyperSMURF

Weka implementation of hyperSMURF using EasyEnsemble and SMOTE

Language: Java - Size: 6.9 MB - Last synced: about 1 month ago - Pushed: over 6 years ago - Stars: 2 - Forks: 4

charite/chipseqknime

KNIME workflow for ChIP-Seq http://charite.github.io/chipseqknime/

Language: CSS - Size: 3.09 MB - Last synced: about 1 month ago - Pushed: about 8 years ago - Stars: 0 - Forks: 0

charite/charite.github.io

Charité Computational Biology Website

Language: CSS - Size: 275 MB - Last synced: about 1 month ago - Pushed: over 5 years ago - Stars: 4 - Forks: 8

charite/jannovar_example_app 📦

Minimal Maven application using Jannovar

Language: Java - Size: 129 KB - Last synced: about 1 month ago - Pushed: almost 9 years ago - Stars: 1 - Forks: 0

charite/jannovar_tutorial 📦

Jannovar Tutorial Applications

Language: Java - Size: 279 KB - Last synced: about 1 month ago - Pushed: almost 9 years ago - Stars: 1 - Forks: 1

charite/asdpex

Language: Java - Size: 1.48 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 7 - Forks: 2

charite/Q

Q ChIP-seq peak caller

Language: C++ - Size: 54.1 MB - Last synced: about 1 month ago - Pushed: almost 7 years ago - Stars: 17 - Forks: 3

charite/weka-GWAVA

Weka implementation of the GWAVA method from Ritchie, G. R. S., Dunham, I., Zeggini, E., & Flicek, P. (2014). Functional annotation of noncoding sequence variants. Nat Methods, 11(3), 294–296. http://doi.org/10.1038/nmeth.2832

Language: Java - Size: 4.95 MB - Last synced: about 1 month ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0