cmap/sushi

Data Processing Pipeline for PRISM Sequencing

Language: R - Size: 4.65 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 2 - Forks: 1

cmap/dockerized_mts Fork of broadinstitute/dockerized_mts

Language: R - Size: 15.2 MB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 6 - Forks: 3

cmap/cmapR

Tools for manipulating annotated data matrices

Language: R - Size: 8.55 MB - Last synced at: 14 days ago - Pushed at: over 3 years ago - Stars: 91 - Forks: 34

cmap/morpheus.js

JavaScript matrix visualization and analysis

Language: JavaScript - Size: 33.6 MB - Last synced at: 22 days ago - Pushed at: 9 months ago - Stars: 65 - Forks: 23

cmap/cmapPy

Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools

Language: Python - Size: 19.9 MB - Last synced at: 8 days ago - Pushed at: almost 3 years ago - Stars: 130 - Forks: 77

cmap/cmapBQ

Language: Python - Size: 712 KB - Last synced at: 3 months ago - Pushed at: about 3 years ago - Stars: 6 - Forks: 4

cmap/cup

QC module for Luminex based PRISM data

Language: Python - Size: 163 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

cmap/slice-reports

Language: TypeScript - Size: 42 KB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0

cmap/adc-white-paper

Language: Vue - Size: 37.4 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

cmap/prism_lumitracker

Updated version of lumitracker qc figure generation for PRISM

Language: Python - Size: 23.4 KB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

cmap/submission_hub

HTML/CSS of new design to be used in clue

Language: HTML - Size: 12.7 KB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

cmap/queue_manager

Language: Python - Size: 165 KB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0

cmap/sig_xicon

sig_xicon jobs on aws batch

Language: JavaScript - Size: 5.86 KB - Last synced at: about 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

cmap/pestle_tools Fork of NoopDawg/pestle_tools

SigTools in Python

Size: 52.7 KB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

cmap/pdex

Language: HTML - Size: 2.56 MB - Last synced at: about 1 year ago - Pushed at: almost 8 years ago - Stars: 0 - Forks: 0

cmap/mts_biomarker

Language: R - Size: 53.7 KB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

cmap/lincs-cell-painting Fork of broadinstitute/lincs-cell-painting

Processed Cell Painting Data for the LINCS Drug Repurposing Project

Language: Jupyter Notebook - Size: 108 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

cmap/jupyterhub

Language: HTML - Size: 70.3 KB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

cmap/jupyter-docker

Language: Dockerfile - Size: 9.77 KB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

cmap/gene_deconvolution_challenge

Source code for the top finishers from the CMap Gene Deconvolution challenge

Language: Python - Size: 10.2 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 1

cmap/GCT2BQ

Language: JavaScript - Size: 1.95 KB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

cmap/dockers

Language: JavaScript - Size: 9.77 KB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 1

cmap/demo-portal-logn

Language: Vue - Size: 11.7 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

cmap/cup_streamsync

Streamsync version of cup app

Language: Python - Size: 14.6 KB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

cmap/CTE Fork of mrblasco/CTE

What the Package Does (One Line, Title Case)

Size: 45.2 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

cmap/deconv

Repo for paper: "Improving Deconvolution Methods in Biology"

Language: R - Size: 113 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

cmap/CTG_pipeline 📦

Language: R - Size: 1.53 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

cmap/ctg

Sync and sort data for use with the CTG app

Language: Python - Size: 1000 Bytes - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

cmap/cmap_notebooks

CMAP public jupyter notebooks

Language: Jupyter Notebook - Size: 774 KB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1

cmap/cmap-sig-tools

Reference documentation and usage notes for core CMap tools.

Language: Shell - Size: 493 KB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

cmap/lincs-workshop-2020

CMap Notebooks for LINCS 2020 Workshop

Language: Jupyter Notebook - Size: 15.6 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 39 - Forks: 17

cmap/morpheus.R

R interface to morpheus.js heatmap widget

Language: R - Size: 4.15 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 35 - Forks: 14

cmap/cmapM

Connectivity Map analysis in MATLAB

Language: C - Size: 135 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 38 - Forks: 17

cmap/panel

QC app implemented in panel

Language: Jupyter Notebook - Size: 2.93 KB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

cmap/morpheus-export

export static heat maps using Morpheus.js

Language: JavaScript - Size: 20.5 KB - Last synced at: 20 days ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 0

cmap/psp

Python scripts for data processing and analysis of P100 and GCP data

Language: Python - Size: 8.35 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 10 - Forks: 7

cmap/merino

Pre-publication data flow for PRISM multiplex cell viability assay

Language: Python - Size: 30.2 MB - Last synced at: 12 months ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 1

cmap/cmapJ

Connectivity Map software for Java

Language: Java - Size: 12 MB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

cmap/gsea_wrapper

Language: Java - Size: 13.8 MB - Last synced at: about 1 year ago - Pushed at: over 9 years ago - Stars: 0 - Forks: 0