deeptools/pyGenomeTracks

python module to plot beautiful and highly customizable genome browser tracks

Language: Python - Size: 182 MB - Last synced at: 2 days ago - Pushed at: about 1 year ago - Stars: 837 - Forks: 122

deeptools/deepTools

Tools to process and analyze deep sequencing data.

Language: Python - Size: 121 MB - Last synced at: 1 day ago - Pushed at: about 2 months ago - Stars: 734 - Forks: 218

deeptools/py2bit

A python library for accessing 2bit files

Language: C - Size: 59.6 KB - Last synced at: 8 days ago - Pushed at: 8 months ago - Stars: 20 - Forks: 9

deeptools/HiCExplorer

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.

Language: Python - Size: 585 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 251 - Forks: 72

deeptools/pyBigWig

A python extension for quick access to bigWig and bigBed files

Language: C - Size: 777 KB - Last synced at: 15 days ago - Pushed at: 8 months ago - Stars: 233 - Forks: 53

deeptools/HiCMatrix

Language: Python - Size: 30.4 MB - Last synced at: 19 days ago - Pushed at: over 1 year ago - Stars: 13 - Forks: 8

deeptools/Knight-Ruiz-Matrix-balancing-algorithm

Language: C++ - Size: 940 KB - Last synced at: 14 days ago - Pushed at: over 4 years ago - Stars: 10 - Forks: 4

deeptools/HiCBrowser

Simple web browser to visualize HiC tracks

Language: JavaScript - Size: 17.6 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 17 - Forks: 5

deeptools/deeptools_intervals

A python library for constructing interval trees with associated exon/annotation information

Language: C - Size: 260 KB - Last synced at: 22 days ago - Pushed at: about 6 years ago - Stars: 6 - Forks: 2

deeptools/docker-galaxy-hicexplorer

Galaxy Docker Image for the HiCExplorer

Language: HTML - Size: 2.27 MB - Last synced at: 6 days ago - Pushed at: over 6 years ago - Stars: 10 - Forks: 3

deeptools/github-actions

Play around with github actions

Language: JavaScript - Size: 17.5 MB - Last synced at: 11 days ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1

deeptools/hicBuildMatrixCpp

C++ implementation of hicBuildMatrix

Language: C++ - Size: 22.3 MB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 2

deeptools/docker-hicbrowser

Docker container for easy deployment of the HiCBrowser

Language: Dockerfile - Size: 30.3 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0