Ecosyste.ms: Repos
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GitHub / ghislainv 72 repositories
Researcher in ecology and applied statistics at Cirad
ghislainv/geefcc
📦🐍 geefcc Python package to get forest cover change data from Google Earth Engine
Language: Python - Size: 6.38 MB - Last synced: 2 days ago - Pushed: 2 days ago - Stars: 0 - Forks: 0
ghislainv/forestatrisk
📦🐍 Python package to model and forecast the risk of deforestation
Language: Python - Size: 87.9 MB - Last synced: 5 days ago - Pushed: 9 days ago - Stars: 115 - Forks: 27
ghislainv/test-xee
Test for using xee
Language: Python - Size: 13.6 MB - Last synced: 9 days ago - Pushed: 9 days ago - Stars: 0 - Forks: 0
ghislainv/riskmapjnr
📦🐍 Mapping deforestation risk following JNR methodology
Language: Python - Size: 109 MB - Last synced: 15 days ago - Pushed: about 2 months ago - Stars: 21 - Forks: 7
ghislainv/ghislainv.github.io
Ghislain Vieilledent's website on ecology and applied statistics
Language: R - Size: 459 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 3 - Forks: 1
ghislainv/oral-presentations
:tv: Oral presentations
Language: TeX - Size: 346 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 1 - Forks: 0
ghislainv/forestatrisk-qgis-plugin
:package: :snake: :earth_africa: QGis plugin for the forestatrisk Python package
Language: Python - Size: 17.9 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0
ghislainv/forest-plot-grid
Make a forest plot grid from point coordinates and azimut
Language: R - Size: 97.7 KB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
ghislainv/plant-available-water-deficit-french-guiana
Computing plant available water deficit in French Guiana
Size: 0 Bytes - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
ghislainv/soil-texture-map-french-guiana
Soil texture map in French Guiana
Size: 7.09 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
ghislainv/uIV
:snake: :pencil: Unstructured intraspecific variability (uIV) and community dynamics
Language: Python - Size: 338 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0
ghislainv/forestatrisk-tropics
:earth_africa: :pencil: Modelling and forecasting deforestation in the tropics
Language: R - Size: 123 MB - Last synced: about 1 month ago - Pushed: 6 months ago - Stars: 29 - Forks: 2
ghislainv/gecevar
:package: :earth_americas: :mountain: :sunny: :cloud: :seedling: Get climatic and other environmental variables
Language: R - Size: 2.99 MB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 6 - Forks: 0
ghislainv/deforestation-maps-Mada
:pencil: Sixty years of deforestation and forest fragmentation in Madagascar
Language: TeX - Size: 55.3 MB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 11 - Forks: 1
ghislainv/hSDM
:package: R package for hierarchical Bayesian species distribution models
Language: C - Size: 84.9 MB - Last synced: 4 months ago - Pushed: 9 months ago - Stars: 9 - Forks: 0
ghislainv/lidar_vs_globalcanopyheight
Comparing global canopy height (Lang et al. 2023) and LiDAR data
Language: R - Size: 6.46 MB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 0 - Forks: 0
ghislainv/baobabs_mada
:deciduous_tree: :earth_africa: :notebook: Code and data for Tagliari et al. 2021, Not all species will migrate poleward as the climate warms: the case of the seven baobab species in Madagascar. Global Change Biology.
Language: R - Size: 62 MB - Last synced: 4 months ago - Pushed: over 2 years ago - Stars: 3 - Forks: 1
ghislainv/menabe
Deforestation in central Menabe, western Madagascar
Language: TeX - Size: 215 MB - Last synced: 4 months ago - Pushed: over 4 years ago - Stars: 3 - Forks: 0
ghislainv/wood-density-Cirad
The Cirad wood density database
Language: TeX - Size: 2.37 MB - Last synced: 4 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0
ghislainv/JSDM-PyMC
Fitting joint species distribution models with PyMC
Language: CSS - Size: 10 MB - Last synced: 4 months ago - Pushed: 9 months ago - Stars: 2 - Forks: 0
ghislainv/JSDM_French_Guiana Fork of JeanneClement/JSDM_French_Guiana
Fitting JSDM in French Guiana
Language: HTML - Size: 19.1 MB - Last synced: 4 months ago - Pushed: 10 months ago - Stars: 0 - Forks: 0
ghislainv/individual-covariance-and-coexistence
Individual covariance and species coexistence
Language: R - Size: 149 KB - Last synced: 2 months ago - Pushed: 11 months ago - Stars: 0 - Forks: 0
ghislainv/pywdpa
:package: :snake: pywda Python package for simple access to world's protected areas
Language: Python - Size: 2.95 MB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 6 - Forks: 1
ghislainv/articles-jeanne Fork of JeanneClement/Articles
Size: 93.9 MB - Last synced: 4 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
ghislainv/reports-jeanne Fork of JeanneClement/Report
Report joint species models
Size: 177 MB - Last synced: 4 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
ghislainv/presentations-jeanne Fork of JeanneClement/presentations
Size: 52 MB - Last synced: 4 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
ghislainv/intraco
Reports and presentations for the INTRACO project
Language: TeX - Size: 31.3 MB - Last synced: 4 months ago - Pushed: about 1 year ago - Stars: 1 - Forks: 0
ghislainv/getCordex Fork of sylvainschmitt/getCordex
Get projection data from CORDEX
Size: 210 KB - Last synced: 4 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
ghislainv/cv
Ghislain Vieilledent's curriculum vitae
Language: TeX - Size: 4.27 MB - Last synced: 4 months ago - Pushed: about 1 year ago - Stars: 3 - Forks: 0
ghislainv/jSDM
:package: R package for joint species distribution models
Language: C++ - Size: 673 MB - Last synced: 30 days ago - Pushed: 9 months ago - Stars: 10 - Forks: 7
ghislainv/JSDM-NC
Community maps in New Caledonia using Joint Species Distribution Models
Language: HTML - Size: 9.15 MB - Last synced: 4 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
ghislainv/dotemacs
Emacs configuration file
Language: Emacs Lisp - Size: 91.8 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0
ghislainv/forestatrisk-newcaledonia
Modelling and forecasting deforestation in New-Caledonia
Language: Jupyter Notebook - Size: 1.29 MB - Last synced: 4 months ago - Pushed: almost 3 years ago - Stars: 2 - Forks: 0
ghislainv/riskmapjnr-sepal-module Fork of 12rambau/riskmapjnr
Use the riskmapjnr methodology in SEPAL to produce deforestation risk map
Size: 29.3 KB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
ghislainv/BAP Fork of aloctavodia/BAP
Bayesian Analysis with Python (Second Edition)
Size: 123 MB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0
ghislainv/ghislainv
Size: 17.6 KB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0
ghislainv/coexIV Fork of camillegirardtercieux/coexIV
:tree: Reproductible analyses supporting the idea that intraspecific variability is mainly due to environmental heterogeneity and does not blur species niche differences nor slow down competitive exclusion.
Size: 140 MB - Last synced: 4 months ago - Pushed: about 3 years ago - Stars: 1 - Forks: 0
ghislainv/box-cyclone-fire
Box for tropical cyclone-fire interaction in Madagascar
Language: R - Size: 45.9 MB - Last synced: 4 months ago - Pushed: almost 3 years ago - Stars: 1 - Forks: 0
ghislainv/araucaria_sdm Fork of masemuta/araucaria_sdm
R script to reproduce results of article "Relict populations of Araucaria angustifolia will be fragmented and poorly protected under climate change in southern Brazil"
Size: 23.5 MB - Last synced: 4 months ago - Pushed: almost 3 years ago - Stars: 1 - Forks: 0
ghislainv/hSDM_Tutorial Fork of adammwilson/hSDM_Tutorial
Language: R - Size: 22.2 MB - Last synced: 4 months ago - Pushed: about 9 years ago - Stars: 1 - Forks: 0
ghislainv/abmispecies Fork of psolymos/abmispecies
ABMI Species Website: source code development
Language: HTML - Size: 891 KB - Last synced: 4 months ago - Pushed: almost 9 years ago - Stars: 1 - Forks: 0
ghislainv/example-models Fork of stan-dev/example-models
Language: R - Size: 54.5 MB - Last synced: 4 months ago - Pushed: almost 9 years ago - Stars: 1 - Forks: 0
ghislainv/LearningBayes Fork of florianhartig/LearningBayes
Teaching material for Bayesian Statistics
Language: R - Size: 8.47 MB - Last synced: 4 months ago - Pushed: over 8 years ago - Stars: 1 - Forks: 0
ghislainv/madaclim
Free climate and environmental data for Madagascar
Language: R - Size: 187 MB - Last synced: 4 months ago - Pushed: over 7 years ago - Stars: 1 - Forks: 1
ghislainv/osgeopy-code Fork of cgarrard/osgeopy-code
Code for the book Open source geoprocessing with Python
Language: Python - Size: 169 KB - Last synced: 4 months ago - Pushed: about 8 years ago - Stars: 1 - Forks: 0
ghislainv/workshopReCaREDD
Scenarios of deforestation for tropical countries
Language: Jupyter Notebook - Size: 8.26 MB - Last synced: 4 months ago - Pushed: almost 7 years ago - Stars: 7 - Forks: 0
ghislainv/accuracy_NBR
Estimate accuracy of delta NBR for forest degradation
Language: R - Size: 103 KB - Last synced: 4 months ago - Pushed: almost 7 years ago - Stars: 2 - Forks: 0
ghislainv/Blog Fork of petrkeil/Blog
This repository contains codes for all of my blog posts since March 11 2015.
Size: 52.1 MB - Last synced: 4 months ago - Pushed: over 6 years ago - Stars: 1 - Forks: 0
ghislainv/docker-debian-jupyter
Docker with debian 8 and Jupyter notebook
Language: Shell - Size: 2.21 MB - Last synced: 4 months ago - Pushed: over 6 years ago - Stars: 2 - Forks: 0
ghislainv/roads-osm
Extract African roads from OpenStreet Map
Language: Python - Size: 27.3 KB - Last synced: 4 months ago - Pushed: over 6 years ago - Stars: 3 - Forks: 0
ghislainv/docker-deforestprob
Docker to run the Python deforestprob module
Language: Shell - Size: 2.22 MB - Last synced: 4 months ago - Pushed: over 6 years ago - Stars: 1 - Forks: 0
ghislainv/clean-overlay-vectors
R/GRASS scripts to clean and overlay vector data
Language: R - Size: 171 KB - Last synced: 4 months ago - Pushed: over 6 years ago - Stars: 1 - Forks: 0
ghislainv/lifezones
Global bioclimatic scheme for the classification of land areas
Size: 3.34 MB - Last synced: 4 months ago - Pushed: over 6 years ago - Stars: 1 - Forks: 0
ghislainv/geoprocessing-python
Various Python scripts for geoprocessing
Language: HTML - Size: 2.73 MB - Last synced: 4 months ago - Pushed: about 6 years ago - Stars: 1 - Forks: 0
ghislainv/docker_postgres838_postgis135 Fork of nevrome/docker_postgres838_postgis135
Docker image for PostgreSQL 8.3.8 with PostGIS 1.3.5
Size: 4.88 KB - Last synced: 4 months ago - Pushed: almost 6 years ago - Stars: 1 - Forks: 0
ghislainv/greta_test
Test of the greta R package
Language: R - Size: 86.9 KB - Last synced: 4 months ago - Pushed: about 6 years ago - Stars: 1 - Forks: 0
ghislainv/MCMCpack-parallel
Parallel processes with MCMCpack
Language: R - Size: 7.27 MB - Last synced: 4 months ago - Pushed: over 5 years ago - Stars: 3 - Forks: 0
ghislainv/docker-forestatrisk
Docker file for R, RStudio, reticulate, Python 3 and forestatrisk
Language: Dockerfile - Size: 20.5 KB - Last synced: 4 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0
ghislainv/chelsafrica
African climate
Language: R - Size: 37.5 MB - Last synced: 4 months ago - Pushed: over 5 years ago - Stars: 1 - Forks: 0
ghislainv/forestatrisk-Mada
Spatial modelling and forecasting of deforestation in Madagascar
Language: R - Size: 5.38 MB - Last synced: 4 months ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 0
ghislainv/Warton2015-TRENDS
Joint species distribution models from Warton et al. 2015 in Trends in Ecology & Evolution
Language: R - Size: 25.4 KB - Last synced: 4 months ago - Pushed: about 5 years ago - Stars: 1 - Forks: 0
ghislainv/useR-2019-tutorials
useR 2019 tutorials
Size: 13.7 KB - Last synced: 4 months ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 0
ghislainv/forecasting-deforestation-Mada
Language: HTML - Size: 11.7 MB - Last synced: 4 months ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 0
ghislainv/debian-install
Useful files to install GNU Linux Debian
Language: Shell - Size: 25.4 KB - Last synced: 4 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 0
ghislainv/forestatrisk-tutorial
Tutorial to use the 'forestatrisk' Python package to model and forecast tropical deforestation
Language: HTML - Size: 30.2 MB - Last synced: 4 months ago - Pushed: over 4 years ago - Stars: 3 - Forks: 0
ghislainv/FRB-reports-BioSceneMada
Reports for the FRB project BioSceneMada
Language: HTML - Size: 67.8 MB - Last synced: 4 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 0
ghislainv/gdal2tiles-leaflet
Tiling big raster files to plot maps with leaflet
Language: Shell - Size: 39.1 KB - Last synced: 4 months ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0
ghislainv/gorillas
:gorilla: :congo_kinshasa: Estimating Grauer's gorilla distribution and population size in eastern Democratic Republic of the Congo
Language: R - Size: 1.82 MB - Last synced: 4 months ago - Pushed: about 4 years ago - Stars: 2 - Forks: 0
ghislainv/ghislainv.fr
Personal website
Language: R - Size: 1.1 MB - Last synced: 4 months ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0
ghislainv/GDAL-rasterio-tutorials Fork of neerubhai/GDAL-rasterio-tutorials
Tutorials on how to use GDAL Python API and rasterio for raster data management, transformation, analysis and visualization tasks.
Size: 3.47 MB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0
ghislainv/forest-cover-percentage
Compute forest cover percentage at low resolution from a high resolution forest cover map
Size: 14.6 KB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0
ghislainv/ecoregions-mada
Plot Madagascar ecoregions
Language: R - Size: 3.46 MB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0
ghislainv/orgcss Fork of gongzhitaao/orgcss
Simple and clean CSS for Org-exported HTML
Language: CSS - Size: 2.1 MB - Last synced: 4 months ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0
ghislainv/docker-forestatrisk-tropics
:whale: Docker for the forestatrisk-tropics project
Language: Dockerfile - Size: 28.3 KB - Last synced: 4 months ago - Pushed: about 2 years ago - Stars: 1 - Forks: 0
ghislainv/ExS-interactions
E x S interactions in high dimension explain species coexistence
Language: R - Size: 788 KB - Last synced: 4 months ago - Pushed: about 2 years ago - Stars: 2 - Forks: 0
ghislainv/coexist
Theoretical high-dimensional model for species coexistence
Language: R - Size: 61.9 MB - Last synced: 4 months ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 1
ghislainv/jrc-lidar-height-growth
Language: R - Size: 65.4 KB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0
ghislainv/Vieilledent2012-Ecological-Applications
R script and data for Vieilledent2012-Ecological-Applications
Language: PostScript - Size: 195 KB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0
ghislainv/U-shape-tree-mortality-DBH
Fitting U shape tree mortality model with DBH
Language: R - Size: 236 KB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0
ghislainv/speciesatlas
Language: HTML - Size: 284 MB - Last synced: 4 months ago - Pushed: over 3 years ago - Stars: 2 - Forks: 1
ghislainv/carbonmap
Bioclimatic envelope models predict a decrease in tropical forest carbon stocks with climate change in Madagascar
Language: R - Size: 244 KB - Last synced: 4 months ago - Pushed: over 5 years ago - Stars: 3 - Forks: 0
ghislainv/UseR2019 Fork of edzer/UseR2019
Language: R - Size: 5.38 MB - Last synced: 4 months ago - Pushed: almost 5 years ago - Stars: 2 - Forks: 0
ghislainv/forestatrisk-jupyter-notebook
Jupyer notebook for the `forestatrisk` Python package
Language: Jupyter Notebook - Size: 1.03 MB - Last synced: 4 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 0
ghislainv/twoe
Estimating tree species demography and simulating forest dynamics
Language: C++ - Size: 450 KB - Last synced: 4 months ago - Pushed: about 5 years ago - Stars: 2 - Forks: 0
ghislainv/gifdefor
Animated gif showing deforestation trends
Language: R - Size: 20.5 KB - Last synced: 4 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0