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GitHub / ifremer-bioinformatics 5 repositories

Home page of tools made by Ifremer's Bioinformatics Core Facility (SeBiMER)

ifremer-bioinformatics/ToolDirectory

Dynamic visualization of softwares managed by a Bioinformatics Core Facility

Language: Python - Size: 2.24 MB - Last synced: about 2 months ago - Pushed: about 1 year ago - Stars: 4 - Forks: 1

ifremer-bioinformatics/samba

Standardized and Automated MetaBarcoding Analyses workflow (Mirror)

Language: Nextflow - Size: 109 MB - Last synced: 11 months ago - Pushed: 11 months ago - Stars: 10 - Forks: 5

ifremer-bioinformatics/ifremer-bioinformatics.github.io

public web site of SeBiMER on Github

Language: JavaScript - Size: 144 MB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 1

ifremer-bioinformatics/orson

Workflow for prOteome and tRanScriptome functiOnal aNnotation. CAUTION : project has moved to Gitlab.

Language: Nextflow - Size: 1.2 MB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 5 - Forks: 3

ifremer-bioinformatics/FLORA

workFLOw for Rnaseq analyses of the Amocyst project

Language: Nextflow - Size: 34.5 MB - Last synced: about 1 year ago - Pushed: about 2 years ago - Stars: 1 - Forks: 1

ifremer-bioinformatics/omics-catalog

A FAIR toolkit for fast visualization of omics data and metadata

Language: JavaScript - Size: 10.1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 4 - Forks: 0

ifremer-bioinformatics/BeeDeeM-Tools

Sequence management tools relying on the Bioinformatics Databank Manager System, BeeDeeM (miror).

Language: Java - Size: 23 MB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

ifremer-bioinformatics/celia

Language: Python - Size: 351 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 1 - Forks: 0

ifremer-bioinformatics/pallor

Language: Nextflow - Size: 25.3 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 1

ifremer-bioinformatics/Keshif Fork of adilyalcin/Keshif

Keshif - Data Made Explorable (Prototype)

Size: 109 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

ifremer-bioinformatics/BLAST-PLAST-bench

Scripts to run benchmarks of BLAST and PLAST on a supercomputer

Language: Shell - Size: 144 KB - Last synced: 7 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0