GitHub / joshuagryphon 6 repositories

Biologist, tinkerer, obsessed with crossword puzzles, and interested in new challenges.

• Repositories 6
• Sort

  • Recently Pushed
  • Stars
  • Forks

joshuagryphon/rcfiles

configuration files

Language: Shell - Size: 38.1 KB - Last synced: about 1 month ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

joshuagryphon/minimap2 Fork of lh3/minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

Size: 1.24 MB - Last synced: about 1 month ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

joshuagryphon/plastid

Position-wise analysis of sequencing and genomics data

Language: C - Size: 23.6 MB - Last synced: 6 days ago - Pushed: 11 months ago - Stars: 35 - Forks: 16

joshuagryphon/minihmm

Toy Python library for hidden Markov models

Language: Python - Size: 508 KB - Last synced: about 1 month ago - Pushed: 2 months ago - Stars: 1 - Forks: 1

joshuagryphon/twobitreader Fork of benjschiller/twobitreader

A fast python class for reading 2-bit files (used by UCSC genome browser)

Language: Python - Size: 110 KB - Last synced: about 1 month ago - Pushed: over 8 years ago - Stars: 0 - Forks: 0

joshuagryphon/pysam Fork of pysam-developers/pysam

Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.

Language: C - Size: 9.6 MB - Last synced: about 1 month ago - Pushed: over 8 years ago - Stars: 0 - Forks: 0