joycewang914/NH_VRE_environmental_contamination

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joycewang914/Nursing_Home_Patient_Gut_Microbiota

Identifying gut microbiome features associated with the risk of acquiring an enteric drug-resistant organism (e.g. vancomycin-resistant Enterococcus and resistant gram-negative bacteria) in patients recently discharged from acute-care hospital and admitted into nursing homes.

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joycewang914/Microbial_Antibiotic_Network_in_Nursing_Homes

Interaction networks between antibiotic exposure, microbial factors and clinical features in nursing home patients influence the risk of catheter-associated urinary tract infection.

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joycewang914/Genomic_and_Patient_Transfer_Analyasis_of_Resistant_Bacteria

Active surveillance of newly-admitted nursing home patients for colonization of antibiotic-resistant bacteria reveals that multiple lineages have spread across southeast Michigan healthcare networks.

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joycewang914/LDV-analysis

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joycewang914/codeclub

This is a code club repository.

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joycewang914/evaluate-gene-level-metagenomics-tools Fork of %{name} FredHutch/evaluate-gene-level-metagenomics-tools

Reproducible Evaluation of Gene-Level Metagenomics Tools

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joycewang914/compositionality_test Fork of %{name} apalleja/compositionality_test

Code to test if your differential abundance results based on relative abundances of microbes are affected by compositionality

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joycewang914/mmvec Fork of %{name} biocore/mmvec

Neural networks for microbe-metabolite interaction analysis

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joycewang914/Recovery_Determinants_Study Fork of %{name} CSB5/Recovery_Determinants_Study

Data and scripts of Antibiotic Recovery Study

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joycewang914/mikRopML Fork of %{name} SchlossLab/mikropml

User-friendly ML pipeline for microbiome data

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