jtremblay/meco_tools

Bioinformatics tools for microbial ecology

Language: Perl - Size: 639 KB - Last synced: 9 days ago - Pushed: 10 days ago - Stars: 0 - Forks: 0

jtremblay/meco_pipeline

Bioinformatics pipelines for microbial ecology

Language: Python - Size: 354 KB - Last synced: 9 days ago - Pushed: 10 days ago - Stars: 0 - Forks: 0

jtremblay/jtremblay.github.io

Public web hosting

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jtremblay/MiRNATarget

A command line version of the psRNATarget workflow that predicts potential miRNA target locations on a genome.

Language: Python - Size: 2.25 MB - Last synced: 8 months ago - Pushed: over 1 year ago - Stars: 4 - Forks: 0

jtremblay/ShotgunMG

This repository contains the code for ShotgunMG, a Nextflow bioinformatic pipeline for high-resolution metagenomics

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jtremblay/shotgunmg_paper

Resources related to the shotgunmg paper

Language: R - Size: 74.2 KB - Last synced: 9 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

jtremblay/Microbiomics

Figure generation R package oriented for microbiome data

Language: R - Size: 584 KB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

jtremblay/MicrobiomeML

Machine learning for microbiome data

Language: Python - Size: 83 KB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

jtremblay/RDP-training-sets

This repo hosts scripts related to RDP training set generation and formatting

Language: Perl - Size: 70.3 KB - Last synced: 9 months ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 2

jtremblay/microbiomeutils

Python utility to generate distance matrices, perform PCoAs and generate taxonomic summaries using simple tab-separated feature tables.

Language: Python - Size: 275 KB - Last synced: 9 months ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

jtremblay/jtremblay

Size: 2.93 KB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

jtremblay/bioperl-live Fork of bioperl/bioperl-live

Core BioPerl 1.x code

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jtremblay/bioinformatics-training

This is a code repository hosting code for bioinformatics training purposes.

Language: Python - Size: 2.97 MB - Last synced: 9 months ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

jtremblay/SingleCell

Single cell bioinformatics pipeline

Language: Nextflow - Size: 226 KB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 1 - Forks: 0

jtremblay/ShotgunMGUtils

Utilities to organize and query results from the ShotgunMG pipeline.

Language: Python - Size: 3.99 MB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

jtremblay/shared

Language: Jupyter Notebook - Size: 300 KB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

jtremblay/misc

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jtremblay/vi-environment

Files for my custom vi environment

Language: Vim script - Size: 812 KB - Last synced: 9 months ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

jtremblay/PipelineViewer

D3.js project to view bioinformatics pipelines with force graphs.

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jtremblay/MUGQIC_perl

Language: Perl - Size: 387 KB - Last synced: 9 months ago - Pushed: almost 10 years ago - Stars: 0 - Forks: 0