kyleellefsen/cgm

Causal Graphical Models

Language: Python - Size: 102 KB - Last synced: 25 days ago - Pushed: about 2 months ago - Stars: 4 - Forks: 0

kyleellefsen/detect_puffs

A set of algorithms for detecting local calcium signals from image stacks

Language: Python - Size: 1.71 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 4 - Forks: 0

kyleellefsen/pynsight

A Flika plugin. A clone of Insight2 in Python. This can be used to analyze 2D STORM microscopy movies.

Language: Python - Size: 43.9 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 2 - Forks: 0

kyleellefsen/lean_aoc_2023

Language: Lean - Size: 13.7 KB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

kyleellefsen/UCI_Programming_Club Fork of cdcox/PythonClassScriptsV2

UCI Programming Club meets weekly and goes over the basics of programming in Python for non-programmers.

Language: Jupyter Notebook - Size: 28.2 MB - Last synced: 10 months ago - Pushed: about 8 years ago - Stars: 0 - Forks: 1

kyleellefsen/Glams

A browser based animal management system

Language: Python - Size: 1.09 MB - Last synced: 29 days ago - Pushed: about 2 years ago - Stars: 1 - Forks: 3

kyleellefsen/tnt_analyzer

Analysis for Tunneling nanotubes (TNTs)

Language: Python - Size: 2.93 KB - Last synced: over 1 year ago - Pushed: almost 7 years ago - Stars: 1 - Forks: 0

kyleellefsen/GlobalAnalysisPlugin Fork of BrettJSettle/GlobalAnalysisPlugin

Global Analysis plugin for FLIKA program. Fit user-drawn regions of interest to polynomials for rise-fall time calculation.

Language: Python - Size: 1.46 MB - Last synced: over 1 year ago - Pushed: over 6 years ago - Stars: 1 - Forks: 0

kyleellefsen/rodentTracker

a Flika plugin for behavior analysis of rodents

Language: Python - Size: 38.3 MB - Last synced: over 1 year ago - Pushed: about 6 years ago - Stars: 1 - Forks: 0

kyleellefsen/light_sheet_analyzer

Creates and displays 4D images acquired from light sheet microscopy

Language: Python - Size: 3.32 MB - Last synced: over 1 year ago - Pushed: about 6 years ago - Stars: 2 - Forks: 1

kyleellefsen/light_sheet_controller

Controller software for custom light sheet microscope

Language: Python - Size: 5.22 MB - Last synced: over 1 year ago - Pushed: about 6 years ago - Stars: 2 - Forks: 0

kyleellefsen/shadowlessTIRF

Shadowless TIRF Galvo Driver

Language: Python - Size: 263 KB - Last synced: over 1 year ago - Pushed: about 6 years ago - Stars: 2 - Forks: 1

kyleellefsen/kyleellefsen.github.io

Language: Jupyter Notebook - Size: 68.7 MB - Last synced: over 1 year ago - Pushed: over 5 years ago - Stars: 1 - Forks: 0

kyleellefsen/FCS-measurement-software

A tool for acquiring fluorescence correlation spectroscopy data

Language: Python - Size: 156 KB - Last synced: over 1 year ago - Pushed: almost 9 years ago - Stars: 2 - Forks: 0

kyleellefsen/BeamSplitter Fork of BrettJSettle/BeamSplitter

Beam Splitter plugin for flika

Language: Python - Size: 14.6 KB - Last synced: over 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

kyleellefsen/pytest Fork of pytest-dev/pytest

The pytest framework makes it easy to write small tests, yet scales to support complex functional testing

Language: Python - Size: 9.08 MB - Last synced: over 1 year ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

kyleellefsen/canada_japan_puzzle_solver

This code solves a puzzle made by Eitan Cher for the International Puzzle Party 2016.

Language: Python - Size: 2.93 KB - Last synced: over 1 year ago - Pushed: almost 8 years ago - Stars: 0 - Forks: 0

kyleellefsen/Piezo_Channel_Experiments

Language: Python - Size: 14.6 KB - Last synced: over 1 year ago - Pushed: about 8 years ago - Stars: 0 - Forks: 0

kyleellefsen/cell_counter

A simple script used to count labeled neurons in slices

Language: Python - Size: 12.7 MB - Last synced: over 1 year ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0