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GitHub / miguelarbesu 30 repositories
Data scientist in Structural Biology
miguelarbesu/nmrplot
A python tool for plotting NMR spectra
Language: Jupyter Notebook - Size: 509 KB - Last synced: 13 days ago - Pushed: 13 days ago - Stars: 4 - Forks: 1
miguelarbesu/hugo-second-brain-theme
Size: 823 KB - Last synced: about 2 months ago - Pushed: 11 months ago - Stars: 0 - Forks: 0
miguelarbesu/Workshop-TimeSeries-Forecaster Fork of chris-elia/Workshop-TimeSeries-Forecaster
Language: Jupyter Notebook - Size: 1.48 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0
miguelarbesu/nmr_tr2D
NmrPipe scripts to batch process 2D NMR experiments acquired consecutively as a "time-resolved" serie.
Language: Shell - Size: 36.1 KB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0
miguelarbesu/miguelarbesu
My personal website
Language: Jupyter Notebook - Size: 30.9 MB - Last synced: about 2 months ago - Pushed: 5 months ago - Stars: 0 - Forks: 0
miguelarbesu/pulsecalc
A CLI tool for NMR spectroscopists to calculate RF pulse powers, lengths and frequencies
Language: Python - Size: 335 KB - Last synced: about 2 months ago - Pushed: about 2 years ago - Stars: 1 - Forks: 0
miguelarbesu/yerma
Language: Python - Size: 203 KB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
miguelarbesu/pluq Fork of kfritzsc/pluq
Python tools for analyzing the PACSY NMR chemical shift database and assigning protein chemical shifts
Size: 27.6 MB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
miguelarbesu/phd_thesis_markdown Fork of tompollard/phd_thesis_markdown
Template for writing a PhD thesis in Markdown
Language: HTML - Size: 22.9 MB - Last synced: about 2 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
miguelarbesu/nmr_utils
Collection of useful tools to deal with NMR datasets.
Language: Jupyter Notebook - Size: 25.4 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
miguelarbesu/nmrglue Fork of jjhelmus/nmrglue
A module for working with NMR data in Python
Language: Python - Size: 18.8 MB - Last synced: about 2 months ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0
miguelarbesu/nmr_bmrb-chemical-shifts
A visualization tool for the BMRB chemical shift statistics
Language: HTML - Size: 487 KB - Last synced: about 2 months ago - Pushed: about 2 years ago - Stars: 1 - Forks: 0
miguelarbesu/mutant_building
Language: Python - Size: 9.77 KB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
miguelarbesu/napari-nmr-reader
A napari plugin to read NMR spectra
Language: Python - Size: 6.84 KB - Last synced: about 2 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0
miguelarbesu/FarSeer-NMR Fork of Farseer-NMR/FarSeer-NMR
A full suite to automatically treat NMR peaklists and to calculate and plot the derived structural parameters from multivariable series of biomolecular NMR experiments.
Language: Python - Size: 60 MB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
miguelarbesu/esm Fork of facebookresearch/esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
Language: Python - Size: 10.3 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
miguelarbesu/esm_contacts
A survey of contact predictions with ESM protein language models
Language: Jupyter Notebook - Size: 1.65 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0
miguelarbesu/datalift-summit Fork of jhoetter/datalift-summit
All the necessary files for the datalift summit workshop.
Size: 13 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0
miguelarbesu/cookiecutter-cms Fork of MolSSI/cookiecutter-cms
Python-centric Cookiecutter for Molecular Computational Chemistry Packages
Size: 189 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
miguelarbesu/cookiecutter-data-science Fork of drivendata/cookiecutter-data-science
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.
Language: Python - Size: 613 KB - Last synced: about 2 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
miguelarbesu/dMaSIF Fork of FreyrS/dMaSIF
Size: 2.86 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0
miguelarbesu/cookiecutter-reproducible-science Fork of mkrapp/cookiecutter-reproducible-science
Boilerplate for Python-powered open science
Language: Python - Size: 117 KB - Last synced: about 2 months ago - Pushed: about 2 years ago - Stars: 1 - Forks: 0
miguelarbesu/ccpnmr-cc-patterns Fork of jorenretel/ccpnmr-cc-patterns
Visualize cross-peak patterns in 2D 13C-13C correlation spectra based on labeling schemes and present assignments
Language: Python - Size: 45.9 KB - Last synced: about 2 months ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0
miguelarbesu/cicada-songs
Language: Jupyter Notebook - Size: 26.6 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0
miguelarbesu/asd-asd
Language: HTML - Size: 556 KB - Last synced: about 2 months ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0
miguelarbesu/AFDB_trim_disorder
Language: Python - Size: 10.7 KB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
miguelarbesu/AE_pathogens
A bioinformatic study on intestinal pathogen proteins
Language: Jupyter Notebook - Size: 1.03 MB - Last synced: about 2 months ago - Pushed: 4 months ago - Stars: 1 - Forks: 0
miguelarbesu/nmr_napari
A tool for visualization and analysis of nD NMR data sets using napari and nmrglue
Language: Python - Size: 11.3 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0
miguelarbesu/intro_dgm Fork of jmtomczak/intro_dgm
An Introduction to Deep Generative Modeling: Examples
Size: 7.46 MB - Last synced: about 2 months ago - Pushed: 11 months ago - Stars: 0 - Forks: 0
miguelarbesu/berlin-kettlebell-work-group
A repository to log our kettlebell training.
Language: Makefile - Size: 51.8 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 1
miguelarbesu/IUPipe
A pipeline for batch prediction of intrinsic disorder from protein sequences using IUPred 1.0
Language: Python - Size: 19.5 KB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0
miguelarbesu/markdown-cv Fork of elipapa/markdown-cv
My Markdown-formatted CV to render with Jekyll.
Language: CSS - Size: 12.4 MB - Last synced: about 2 months ago - Pushed: 12 months ago - Stars: 0 - Forks: 0