mobidic/MobiDL

MobidicWDL workflows

Language: WDL - Size: 530 KB - Last synced: 23 days ago - Pushed: 24 days ago - Stars: 4 - Forks: 2

mobidic/knotAnnotSV

A simple script to create a customizable html file from an AnnotSV output.

Language: HTML - Size: 7.56 MB - Last synced: 26 days ago - Pushed: 26 days ago - Stars: 17 - Forks: 5

mobidic/Variant-CallerWrapped

Wrapper for Variant-Caller execution

Language: Python - Size: 46.9 KB - Last synced: about 1 month ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 0

mobidic/phenolyzer Fork of WGLab/phenolyzer

phenotype-based prioritization of candidate genes for human diseases

Language: Perl - Size: 42.7 MB - Last synced: about 1 month ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

mobidic/mpaweb

Website for MPA

Language: CSS - Size: 6.12 MB - Last synced: about 1 month ago - Pushed: about 6 years ago - Stars: 1 - Forks: 0

mobidic/oneliners Fork of stephenturner/oneliners

Useful bash one-liners for bioinformatics.

Size: 549 KB - Last synced: about 1 month ago - Pushed: about 6 years ago - Stars: 0 - Forks: 1

mobidic/nenufaar Fork of vidboda/nenufaar

DNA NGS pipeline

Language: Shell - Size: 3.42 MB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 2 - Forks: 0

mobidic/ovirt_api_scripts

python script to manage oVirt from the API

Language: Python - Size: 64.5 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

mobidic/nenufaarityweb

Language: HTML - Size: 14.3 MB - Last synced: about 1 month ago - Pushed: over 6 years ago - Stars: 1 - Forks: 0

mobidic/mobidicweb

web site for mobidic group

Language: CSS - Size: 24.7 MB - Last synced: about 1 month ago - Pushed: over 4 years ago - Stars: 1 - Forks: 1

mobidic/MobiBedAnnotator

This script will annotate a BED file with refSeq NM and exons positions

Language: Shell - Size: 2.49 MB - Last synced: about 1 month ago - Pushed: almost 6 years ago - Stars: 3 - Forks: 1

mobidic/BARMEN

BenchmARking from Mobidic for Exome sequencing at Nucleotide scale

Language: Shell - Size: 58.3 MB - Last synced: about 1 month ago - Pushed: over 5 years ago - Stars: 0 - Forks: 1

mobidic/AddDB_updater

Script to update external cross reference database into a single file

Language: Perl - Size: 122 KB - Last synced: about 1 month ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

mobidic/update_annovar_db

scripts to automatically update ANNOVAR db

Language: Python - Size: 74.2 KB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 11 - Forks: 4

mobidic/SEAL

SEAL db - Simple, Efficient And Lite database for NGS

Language: HTML - Size: 16.7 MB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 8 - Forks: 1

mobidic/MobiCNV

CNV analysis based on the depth of coverage of Illumina data

Language: Python - Size: 4 MB - Last synced: about 1 month ago - Pushed: 8 months ago - Stars: 7 - Forks: 1

mobidic/spliceai

REST API for spliceai

Language: Python - Size: 57.6 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 0

mobidic/Captain-ACHAB

Analysis Converter for Human who might Abhor Bioinformatics. A simple and useful interface to analysis of WES data for molecular diagnosis

Language: Perl - Size: 1.76 MB - Last synced: about 1 month ago - Pushed: 6 months ago - Stars: 4 - Forks: 2

mobidic/MPA

MoBiDiC Priorization Algorithm

Language: Python - Size: 8.62 MB - Last synced: 9 days ago - Pushed: almost 2 years ago - Stars: 10 - Forks: 2

mobidic/Achabilarity

Achab In Singularity, a Singularity Container for Captain Achab (annotation workflow)

Size: 128 KB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

mobidic/MDAPI

RESTful API for MobiDetails - deprecated - see MDUtils repo

Language: Perl - Size: 14.6 KB - Last synced: about 1 month ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

mobidic/autoAchab

script to automatically launch captainAchab MobiDL WDL workflow

Language: Shell - Size: 39.1 KB - Last synced: about 1 month ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

mobidic/Crom-wellWrapped

Wrapper for Cromwell execution

Language: Shell - Size: 3.91 KB - Last synced: about 1 month ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

mobidic/MoLLuDiC

CNV pipeline for MobiDL and Achab

Language: Shell - Size: 265 KB - Last synced: about 1 month ago - Pushed: over 5 years ago - Stars: 0 - Forks: 1

mobidic/Dev-Singularity

Repo for singularity development and test

Language: Shell - Size: 23.4 KB - Last synced: about 1 month ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

mobidic/MobiDL-dev

Developement of new pipeline from MobiDL

Language: wdl - Size: 45.1 MB - Last synced: about 1 month ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0