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GitHub / morispi 8 Repositories

PhD in Bioinformatics. Mostly working on long-read error correction and SV calling.

morispi/CONSENT

Scalable long read self-correction and assembly polishing with multiple sequence alignment

Language: C++ - Size: 15.9 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 53 - Forks: 4

morispi/HG-CoLoR

Hybrid method based on a variable-order de bruijn Graph for the error Correction of Long Reads

Language: C++ - Size: 7.61 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 9 - Forks: 3

morispi/LEVIATHAN

Linked-reads based structural variant caller with barcode indexing

Language: C++ - Size: 49.9 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 2

morispi/LRez

Standalone tool and library allowing to work with barcoded linked-reads

Language: C++ - Size: 2.13 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 12 - Forks: 4

morispi/stageINRIA Fork of JordanTYC/stageINRIA

Language: Python - Size: 35.2 KB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0

morispi/bamtools Fork of pezmaster31/bamtools

C++ API & command-line toolkit for working with BAM data

Language: C++ - Size: 6.13 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

morispi/bioconda-recipes Fork of bioconda/bioconda-recipes

Conda recipes for the bioconda channel.

Size: 298 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

morispi/kPers

Language: C++ - Size: 50.5 MB - Last synced at: about 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 1