neuroneural/brainchop

Brainchop: In-browser 3D MRI rendering and segmentation

Language: JavaScript - Size: 363 MB - Last synced at: 2 days ago - Pushed at: 4 months ago - Stars: 442 - Forks: 54

neuroneural/trends_scripts

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neuroneural/brainchop-cli

Portable and lightweight brain segmentation in the terminal!

Language: JavaScript - Size: 26 MB - Last synced at: 1 day ago - Pushed at: about 1 month ago - Stars: 12 - Forks: 2

neuroneural/pathtree

Marginalizes latent variables in graphical models without losing essential delay (lag) information.

Language: Python - Size: 6.44 MB - Last synced at: 8 days ago - Pushed at: 2 months ago - Stars: 1 - Forks: 0

neuroneural/brainchop-models

Shared repository for storing segmentation models for brainchop and brainchop-cli

Language: Python - Size: 27.9 MB - Last synced at: 3 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

neuroneural/meanMLP

Code examples for model introspection

Language: Jupyter Notebook - Size: 6.61 MB - Last synced at: 4 months ago - Pushed at: 5 months ago - Stars: 5 - Forks: 1

neuroneural/catalyst_example

an example of the training file supporting distributed training and curriculum learning with Catalyst

Language: Python - Size: 196 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 1

neuroneural/AML

Slides and other materials for the advanced machine learning course

Language: HTML - Size: 278 MB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

neuroneural/wirehead

Distributed caching system and wrapper for synthetic data generation

Language: Python - Size: 119 MB - Last synced at: 15 days ago - Pushed at: 5 months ago - Stars: 3 - Forks: 1

neuroneural/catalyst Fork of catalyst-team/catalyst

Accelerated deep learning R&D

Language: Python - Size: 52.6 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

neuroneural/DBNglass

Language: Jupyter Notebook - Size: 11.4 MB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

neuroneural/DeepCSR-fork

Fork of DeepCSR from original bitbucket for research use

Language: Python - Size: 31.5 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 2

neuroneural/cortexGNN

GNN extension to PialNN for OHBM

Language: Python - Size: 222 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

neuroneural/python-icar

Tools for performing group ICA on fMRI data using ICA-Torch

Language: Python - Size: 352 MB - Last synced at: 4 months ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

neuroneural/undersampling-project

Language: Jupyter Notebook - Size: 232 MB - Last synced at: 3 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 1

neuroneural/CSRP-CSRParcellation

CSRParcellation is an advanced extension of the CortexODE framework, integrating cutting-edge Graph Neural Networks and CSR deep learning methodologies to revolutionize cortical surface reconstruction for enhanced neuroimaging analysis.

Language: Python - Size: 31.8 MB - Last synced at: about 1 month ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

neuroneural/autodoc

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neuroneural/polyssifier Fork of alvarouc/polyssifier

run a multitude of classifiers on you data and get an AUC report

Language: Python - Size: 5.99 MB - Last synced at: 4 days ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

neuroneural/mindfultensors

Dataloader that serves (f)MRI images from key-value databases (mongo and Redis to start with)

Language: Python - Size: 45.9 KB - Last synced at: 4 months ago - Pushed at: 12 months ago - Stars: 2 - Forks: 1

neuroneural/brainbow

Scripts for visualizing ICA/ROI brain parcellation

Language: Python - Size: 11.9 MB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 1

neuroneural/BrainPlots Fork of MiaLinlinLu/BrainPlots

Surface reconstruction review analysis at Trends Center

Language: Jupyter Notebook - Size: 2.28 GB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

neuroneural/nobrainer-synthseg Fork of neuronets/nobrainer

A stable fork of synthseg for integration into wirehead

Language: Python - Size: 3.79 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

neuroneural/FastSurfer_benchmark Fork of Deep-MI/FastSurfer

Investigating fastsurfer as a benchmark

Language: Jupyter Notebook - Size: 295 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

neuroneural/gunfolds

Tools for working with compressed graphs and solving forward and the inverse problems in undersampling and latent variable cases. The package provides implementation of MSL, RASL, ASP-based, CSP-based, and other algorithms

Language: Python - Size: 11.3 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 1

neuroneural/DICE

The model accompanying the

Language: Python - Size: 77.1 KB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

neuroneural/neuroneural.github.io

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neuroneural/nshor_docker

Containerized fMRI Preprocessing Pipeline

Language: Shell - Size: 669 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 1

neuroneural/niivue-brainchop Fork of niivue/niivue-brainchop

Niivue + brainchop demo implementation

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neuroneural/algorithms

Design and analysis of algorithms lecture slides

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neuroneural/Meshnet_Cpp

Language: C++ - Size: 289 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

neuroneural/immunetworksapp

Language: Python - Size: 61.5 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

neuroneural/BrainStorms

Language: Python - Size: 11.7 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

neuroneural/Vox2Cortex_fork Fork of ai-med/Vox2Cortex

fork of original vox2cortex

Language: Python - Size: 172 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

neuroneural/Glacier Fork of UsmanMahmood27/Glacier

Language: Python - Size: 52.7 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

neuroneural/meshnetproj

Language: Jupyter Notebook - Size: 23.7 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

neuroneural/doorman

LLM based Q&A retrieval system

Language: Python - Size: 184 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

neuroneural/MeshVit Fork of bbradt/MeshVit

(Dilated) Vision Transformer for Gray/White Matter Segmentation

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neuroneural/Poindexter

Slack bot to summarize research papers

Language: Python - Size: 2.53 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

neuroneural/CortexODE_fork Fork of m-qiang/CortexODE

The official implementation of CortexODE

Language: Python - Size: 43.1 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

neuroneural/PialNN_fork Fork of m-qiang/PialNN

Pial Neural Network

Language: Python - Size: 20.8 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

neuroneural/topofit_fork Fork of neuroneural/topofit

Rapid, topologically-correct cortical surface reconstruction

Language: Python - Size: 61.9 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 1

neuroneural/megprep_docker

Language: Shell - Size: 7.81 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

neuroneural/SurfaceReconstructionReview

A place to welcome users of our review forks

Language: Python - Size: 213 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

neuroneural/topofit Fork of ahoopes/topofit

Rapid, topologically-correct cortical surface reconstruction

Language: Python - Size: 61.8 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 2

neuroneural/mongoslabs

Dataloader that serves MRI images from a mogodb

Language: Python - Size: 13 MB - Last synced at: 6 days ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0

neuroneural/MEGprocessing

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neuroneural/mnist_cnn Fork of minoojl/mnist_cnn

Minoo's project for one of thetasks

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neuroneural/torch-mesh-isect Fork of vchoutas/torch-mesh-isect

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neuroneural/meanNN

A different entropy maximization method for ICA

Language: Jupyter Notebook - Size: 3.7 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

neuroneural/SingularityDevops

singularity containers/dockerfiles for stuff i can't do without sudo

Size: 7.81 KB - Last synced at: 3 months ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

neuroneural/LRP_for_LSTM Fork of ArrasL/LRP_for_LSTM

Layer-wise Relevance Propagation (LRP) for LSTMs

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neuroneural/nobrainer-zoo Fork of neuronets/nobrainer-zoo

A collection of deep learning models for brain imaging.

Language: Python - Size: 281 KB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

neuroneural/trained-models Fork of neuronets/trained-models

Trained TensorFlow models for 3D image processing

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neuroneural/neuro Fork of catalyst-team/neuro

Catalyst.Neuro

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neuroneural/interpreting-brain-dynamics Fork of mmrahman21/interpreting-brain-dynamics

Size: 5.94 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

neuroneural/MILC-scripts Fork of UsmanMahmood27/MILC

Fork trying to run Whole MILC on different datasets

Language: Jupyter Notebook - Size: 446 MB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

neuroneural/corticalflow_fork

fork of bitbucket corticalflow

Language: Python - Size: 253 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

neuroneural/Deep_Learning_Catalyst

Deep learning course for Catalyst

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neuroneural/gunfoldsdocs

Language: Python - Size: 141 MB - Last synced at: 3 months ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 1

neuroneural/exp Fork of Scitator/exp

Experiment Template

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neuroneural/neuroneural

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neuroneural/Undersampled_Graph_Estimation Fork of sergeyplis/Undersampled_Graph_Estimation

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