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GitHub / opensafely-core 57 repositories
The code that runs the OpenSAFELY platform
opensafely-core/research-template-docker
This provides the devcontainer Docker image used by repos created from the OpenSAFELY research template.
Language: Dockerfile - Size: 54.7 KB - Last synced: about 6 hours ago - Pushed: about 8 hours ago - Stars: 0 - Forks: 0
opensafely-core/ehrql
ehrQL: the electronic health record query language for OpenSAFELY
Language: Python - Size: 24.8 MB - Last synced: about 8 hours ago - Pushed: about 9 hours ago - Stars: 6 - Forks: 3
opensafely-core/opensafely-cli
Command line interface for OpenSAFELY
Language: Python - Size: 5.26 MB - Last synced: 3 days ago - Pushed: 4 days ago - Stars: 2 - Forks: 1
opensafely-core/actions-registry
A Django app for the Actions Registry, which lists and displays reusable actions available for studies.
Language: Python - Size: 980 KB - Last synced: 4 days ago - Pushed: 5 days ago - Stars: 0 - Forks: 0
opensafely-core/sysadmin
Various scripts and tools for administering OpenSAFELY organisation and infrastructure
Language: Python - Size: 1.08 MB - Last synced: 7 days ago - Pushed: 7 days ago - Stars: 0 - Forks: 0
opensafely-core/job-runner
A client for running jobs in an OpenSAFELY secure environment, requested via job-server (q.v.)
Language: Python - Size: 2.26 MB - Last synced: 8 days ago - Pushed: 8 days ago - Stars: 3 - Forks: 5
opensafely-core/osgithub
A thin wrapper around the GitHub API for interacting with GitHub repos.
Language: Python - Size: 252 KB - Last synced: 12 days ago - Pushed: 12 days ago - Stars: 0 - Forks: 0
opensafely-core/research-action
A GitHub action for verifying that OpenSAFELY research repos can run correctly
Language: Python - Size: 67.4 KB - Last synced: 13 days ago - Pushed: 26 days ago - Stars: 0 - Forks: 1
opensafely-core/opentelemetry-opensafely 📦
Opentelemetry utils for OpenSAFELY
Language: Just - Size: 20.5 KB - Last synced: 16 days ago - Pushed: 17 days ago - Stars: 0 - Forks: 0
opensafely-core/repo-template
Language: Just - Size: 675 KB - Last synced: 25 days ago - Pushed: 25 days ago - Stars: 2 - Forks: 0
opensafely-core/pipeline
OpenSAFELY Pipeline parsing library
Language: Python - Size: 469 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
opensafely-core/sqlrunner
Language: Python - Size: 537 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 1 - Forks: 0
opensafely-core/airlock
Language: Python - Size: 2.2 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
opensafely-core/job-server
A server for mediating jobs that can be run in an OpenSAFELY secure environment. q.v. job-runner
Language: Python - Size: 16.6 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 6 - Forks: 9
opensafely-core/opencodelists
OpenCodelists is an open platform for creating and sharing codelists of clinical terms and drugs.
Language: Python - Size: 25.4 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 29 - Forks: 9
opensafely-core/reports
Website for viewing OpenSAFELY reports
Language: Python - Size: 2.36 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
opensafely-core/windows-wheels
Location to store windows wheels for installing on TPP backend
Language: Makefile - Size: 2.53 MB - Last synced: about 1 month ago - Pushed: 6 months ago - Stars: 0 - Forks: 0
opensafely-core/tools-docker 📦
Useful debugging tools
Language: Dockerfile - Size: 2.93 KB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
opensafely-core/wheels
Wheelhouse for installing output-publisher dependencies
Size: 825 KB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0
opensafely-core/test-public-repository
Size: 2.93 KB - Last synced: about 1 month ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0
opensafely-core/results-viewer 📦
Tool to generate a static site to view an OpenSAFELY workspaces outputs
Language: HTML - Size: 63.5 KB - Last synced: about 1 month ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 1
opensafely-core/query-engine-spike 📦
Language: Python - Size: 31.3 KB - Last synced: about 1 month ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0
opensafely-core/mkdocs-opensafely-databuilder 📦
An mkdocs plugin for rendering the OpenSAFELY Backend Contracts documentation.
Language: Python - Size: 334 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
opensafely-core/job-integration-tests 📦
Docker configuration and tests to exercise job infrastructure end-to-end
Language: Python - Size: 43.9 KB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
opensafely-core/interactive.opensafely.org 📦
Point-and-click analysis of NHS electronic health records
Language: Python - Size: 2.42 MB - Last synced: about 1 month ago - Pushed: 6 months ago - Stars: 2 - Forks: 0
opensafely-core/emis-tools 📦
Various one-off scripts for working with EMIS backend
Language: Python - Size: 31.3 KB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0
opensafely-core/hq 📦
A place to view repo stats and metrics
Language: Python - Size: 133 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0
opensafely-core/git-server-proxy 📦
A proxy with security features making it suitable for placing in a DMZ
Language: Shell - Size: 12.7 KB - Last synced: about 1 month ago - Pushed: almost 4 years ago - Stars: 5 - Forks: 2
opensafely-core/emis-acceptance-test 📦
Study to generate SQL for EMIS acceptance test
Language: HTML - Size: 209 KB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
opensafely-core/ehrql-example-data
Sample dummy data for learning ehrQL
Size: 1.95 KB - Last synced: about 1 month ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
opensafely-core/dokku-deploy-github-action Fork of idoberko2/dokku-deploy-github-action
Deploy to a dokku instance using Github actions
Size: 7.81 KB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0
opensafely-core/cohort-extractor-v2-documentation 📦
This is a spike to try out Sphinx for documenting the new cohort extractor version 2
Language: Python - Size: 254 KB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0
opensafely-core/datadog-proxy 📦
Language: Shell - Size: 7.81 KB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0
opensafely-core/base-docker
Base docker image for OpenSAFELY action containers
Language: Shell - Size: 55.7 KB - Last synced: about 1 month ago - Pushed: 5 months ago - Stars: 0 - Forks: 0
opensafely-core/backend-server
Infrastructure code for managing partner hosted opensafely backend servers.
Language: Shell - Size: 6.59 MB - Last synced: about 1 month ago - Pushed: about 2 months ago - Stars: 0 - Forks: 2
opensafely-core/codespaces-initiative Fork of opensafely/research-template
Improving the use of OpenSAFELY in Codespaces
Size: 439 KB - Last synced: about 1 month ago - Pushed: 2 months ago - Stars: 0 - Forks: 0
opensafely-core/django_coverage_plugin Fork of nedbat/django_coverage_plugin
A plugin for coverage.py to measure Django template execution
Language: Python - Size: 262 KB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
opensafely-core/jupyter-docker 📦
A temporary solution to running jupyter in OS environments
Language: Python - Size: 46.9 KB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0
opensafely-core/databricks-dbapi Fork of crflynn/databricks-dbapi 📦
DBAPI and SQLAlchemy dialect for Databricks Workspace and SQL Analytics clusters
Language: Python - Size: 72.3 KB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0
opensafely-core/ctds-binary 📦
Binary wheel building for cTDS: https://pypi.org/project/ctds/
Language: Shell - Size: 10.9 MB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
opensafely-core/opensafely-introspection 📦
Language: HTML - Size: 320 KB - Last synced: about 1 month ago - Pushed: 5 months ago - Stars: 0 - Forks: 0
opensafely-core/django-project-template 📦
A Django startproject template
Language: HTML - Size: 14.6 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0
opensafely-core/osi-v2-prototype 📦
Language: HTML - Size: 347 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
opensafely-core/python-docker
Image for running python in OpenSAFELY environments
Language: Python - Size: 184 KB - Last synced: about 1 month ago - Pushed: 5 months ago - Stars: 0 - Forks: 2
opensafely-core/ACRO Fork of AI-SDC/ACRO 📦
Tools for the Automatic Checking of Research Outputs
Size: 1.5 MB - Last synced: about 1 month ago - Pushed: 11 months ago - Stars: 0 - Forks: 0
opensafely-core/scribe 📦
Language: Just - Size: 266 KB - Last synced: about 1 month ago - Pushed: 6 months ago - Stars: 0 - Forks: 0
opensafely-core/.github
Language: Just - Size: 30.3 KB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
opensafely-core/matching
Matches cases to controls for studies
Language: Python - Size: 175 KB - Last synced: 11 days ago - Pushed: 7 months ago - Stars: 6 - Forks: 0
opensafely-core/cohort-extractor
Cohort extractor tool which can generate dummy data, or real data against OpenSAFELY-compliant research databases
Language: Python - Size: 4.21 MB - Last synced: 28 days ago - Pushed: 2 months ago - Stars: 35 - Forks: 13
opensafely-core/backends 📦
SSL holding page for backend certificate management
Language: HTML - Size: 10.7 KB - Last synced: about 1 month ago - Pushed: 10 months ago - Stars: 0 - Forks: 0
opensafely-core/interactive-templates
Code to generate the reports generated by OpenSAFELY Interactive
Language: Python - Size: 851 KB - Last synced: 11 days ago - Pushed: 11 days ago - Stars: 0 - Forks: 0
opensafely-core/r-docker
Docker image for running R scripts in OpenSAFELY
Language: Dockerfile - Size: 210 KB - Last synced: about 1 month ago - Pushed: about 2 months ago - Stars: 1 - Forks: 3
opensafely-core/setup-action
Language: Shell - Size: 22.5 KB - Last synced: about 1 month ago - Pushed: 4 months ago - Stars: 0 - Forks: 0
opensafely-core/vendoring Fork of pradyunsg/vendoring
A command line tool, to simplify vendoring pure Python dependencies.
Size: 212 KB - Last synced: about 1 month ago - Pushed: 4 months ago - Stars: 0 - Forks: 0
opensafely-core/osrelease
Tools for reviewing and publishing study outputs safely from the OpenSAFELY platform
Language: Python - Size: 190 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
opensafely-core/job-runner-dependencies
Bundled dependencies for job-runner
Language: Python - Size: 9.54 MB - Last synced: about 1 month ago - Pushed: about 2 months ago - Stars: 0 - Forks: 1
opensafely-core/stata-docker
Builds the opensafely stata docker image.
Language: Stata - Size: 140 MB - Last synced: 28 days ago - Pushed: 28 days ago - Stars: 0 - Forks: 0
opensafely-core/release-hatch
Small service for serving indexing and local files for viewing, and handling the review process
Language: Python - Size: 405 KB - Last synced: 11 days ago - Pushed: 11 days ago - Stars: 0 - Forks: 1
opensafely-core/proxy
Read-only caching proxy to github.com and ghcr.io.
Language: Shell - Size: 102 KB - Last synced: 23 days ago - Pushed: 24 days ago - Stars: 0 - Forks: 1