GitHub / petteriTeikari 47 Repositories
I am a multidisciplinary research scientist into deep learning, (generative) visual arts and healthcare analytics.
petteriTeikari/UniTS Fork of mims-harvard/UniTS
A unified multi-task time series model.
Language: Python - Size: 145 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

petteriTeikari/KiMoRe_wrapper 📦
KiMoRe dataset
Language: MATLAB - Size: 1.52 MB - Last synced at: 9 months ago - Pushed at: about 6 years ago - Stars: 8 - Forks: 1

petteriTeikari/sigllm Fork of sintel-dev/sigllm
Using Large Language Models for Time Series Anomaly Detection
Size: 4.42 MB - Last synced at: 9 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

petteriTeikari/mixedImageSeparation 📦
with FastICA (and icasso for robustness)
Language: Matlab - Size: 33 MB - Last synced at: 9 months ago - Pushed at: about 7 years ago - Stars: 7 - Forks: 2

petteriTeikari/glaucoma_screening
Health Economics simulation
Language: R - Size: 12.4 MB - Last synced at: 23 days ago - Pushed at: over 7 years ago - Stars: 6 - Forks: 0

petteriTeikari/obsidianTools
Language: Python - Size: 1.8 MB - Last synced at: 5 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

petteriTeikari/vesselNN 📦
vesselNN
Language: C++ - Size: 65.9 MB - Last synced at: 9 months ago - Pushed at: about 9 years ago - Stars: 13 - Forks: 5

petteriTeikari/vesselNN_dataset 📦
2-PM Vessel Dataset
Size: 229 MB - Last synced at: 9 months ago - Pushed at: over 7 years ago - Stars: 14 - Forks: 7

petteriTeikari/spectralLensDensity_purkinjeImages
Error analysis when measuring the spectral transmittance of human ocular media / crystalline lens using Purkinje Images -based method
Language: MATLAB - Size: 42.1 MB - Last synced at: 6 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

petteriTeikari/minivess_mlops
Charissa Poon, Petteri Teikari et al. (2023): "A dataset of rodent cerebrovasculature from in vivo multiphoton fluorescence microscopy imaging", Scientific Data 10, 141 doi: 10.1038/s41597-023-02048-8
Language: Python - Size: 1.49 MB - Last synced at: 6 months ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 0

petteriTeikari/CT_Hemorrhage_LiteratureReview 📦
Size: 96.7 MB - Last synced at: 9 months ago - Pushed at: almost 5 years ago - Stars: 4 - Forks: 0

petteriTeikari/voxelmorph_CT 📦
Language: Python - Size: 17 MB - Last synced at: 9 months ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 0

petteriTeikari/ReReVST-UX-Wrapper Fork of daooshee/ReReVST-Code 📦
UX Wrapper for easier testing of "Consistent Video Style Transfer via Relaxation and Regularization"'s code for video style transfer
Language: Python - Size: 25.6 MB - Last synced at: 9 months ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 2

petteriTeikari/silentSubstitution 📦
Init repository for silent substitution techniques for optimal wavelengths to be used when trying to separate photoreceptor classes
Language: Matlab - Size: 861 KB - Last synced at: 9 months ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

petteriTeikari/spectralSeparability 📦
2-PM Fluorescence Microscopy spectral analysis
Language: Matlab - Size: 2.9 MB - Last synced at: 9 months ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 2

petteriTeikari/twoPhotonVessels 📦
Analysis for 2-PM vasculature
Language: Matlab - Size: 269 MB - Last synced at: 9 months ago - Pushed at: about 10 years ago - Stars: 9 - Forks: 11

petteriTeikari/arduino-v-neusci 📦
Automatically exported from code.google.com/p/arduino-v-neusci
Language: Arduino - Size: 352 KB - Last synced at: 9 months ago - Pushed at: about 10 years ago - Stars: 0 - Forks: 0

petteriTeikari/oddball_threeStimulus Fork of LightingResearchCenter/oddball_threeStimulus 📦
PsychoPy / Matlab code for EEG 3-stimulus oddball
Language: Matlab - Size: 91.5 MB - Last synced at: 9 months ago - Pushed at: over 11 years ago - Stars: 0 - Forks: 0

petteriTeikari/rhythmToolbox 📦
ClockLab -like Matlab functions for chronobiological analysis
Language: Matlab - Size: 1.64 MB - Last synced at: 9 months ago - Pushed at: about 12 years ago - Stars: 1 - Forks: 1

petteriTeikari/daysiduino 📦
Arduino Sketches, etc.
Language: Arduino - Size: 2.82 MB - Last synced at: 9 months ago - Pushed at: about 12 years ago - Stars: 0 - Forks: 0

petteriTeikari/photoreception_tools 📦
Helper matlab functions for nomogram creation and ocular media filtering
Language: Matlab - Size: 309 KB - Last synced at: 9 months ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

petteriTeikari/photoreceptor_fit 📦
Fit compound sensitivity spectrum to spectral measurements
Language: Matlab - Size: 10.2 MB - Last synced at: 9 months ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

petteriTeikari/quick_pooling 📦
Quick's Photoreceptor Pooling model
Language: Matlab - Size: 4.08 MB - Last synced at: 9 months ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

petteriTeikari/R-PLR 📦
Once separate repos combined to one making it easier in the end
Language: R - Size: 32 MB - Last synced at: 9 months ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0

petteriTeikari/RSNA_kaggle_CT_wrangle 📦
R Wrangling to pre-process the "RSNA Intracranial Hemorrhage Detection | Kaggle" dataset
Language: R - Size: 9.9 MB - Last synced at: 9 months ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 0

petteriTeikari/lightLab 📦
Collection of Matlab code scripts for melanopsin photoreception, etc.
Language: MATLAB - Size: 2.9 MB - Last synced at: 9 months ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1

petteriTeikari/vanSomerenPhaseEstimate 📦
MATLAB implementation of the phase estimation described by Van Someren and Nagtegaal E (2007). http://dx.doi.org/10.1016/j.sleep.2007.03.012.
Size: 173 KB - Last synced at: 9 months ago - Pushed at: over 12 years ago - Stars: 0 - Forks: 1

petteriTeikari/SSL_spectrograph_transformer 📦
Language: Python - Size: 25.5 MB - Last synced at: 9 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

petteriTeikari/first-order-model-wrapper Fork of AliaksandrSiarohin/first-order-model 📦
This repository contains the source code for the paper First Order Motion Model for Image Animation
Language: Jupyter Notebook - Size: 71.9 MB - Last synced at: 9 months ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

petteriTeikari/Attention-Gated-Networks Fork of ozan-oktay/Attention-Gated-Networks
Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation
Size: 97.7 KB - Last synced at: over 2 years ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0

petteriTeikari/3dMRISegmentation Fork of BMIRDS/3dMRISegmentation
Code for NeuroImage: Clinical paper "Automatic post-stroke lesion segmentation on MR images using 3D residual convolutional neural network."
Size: 4.38 MB - Last synced at: over 2 years ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0

petteriTeikari/understandingbdl Fork of izmailovpavel/understandingbdl
Size: 1.1 MB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0

petteriTeikari/vissl Fork of facebookresearch/vissl
VISSL is FAIR's library of extensible, modular and scalable components for SOTA Self-Supervised Learning with images.
Language: Jupyter Notebook - Size: 8.67 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

petteriTeikari/EDAR Fork of developer0hye/EDAR
PyTorch implementation of Deep Convolution Networks based on EDSR for Compression(Jpeg) Artifacts Reduction
Size: 37.1 KB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

petteriTeikari/pixel-nerf Fork of sxyu/pixel-nerf
PixelNeRF Official Repository (WIP)
Size: 2.7 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

petteriTeikari/xgboost-survival-embeddings Fork of loft-br/xgboost-survival-embeddings
Improving XGBoost survival analysis with embeddings and debiased estimators
Language: Python - Size: 10.2 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

petteriTeikari/pycox Fork of havakv/pycox
Survival analysis with PyTorch
Size: 2.4 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

petteriTeikari/brats_segmentation-pytorch Fork of doublechenching/brats_segmentation-pytorch
3d unet + vae, repoduce brats2018 winner solution
Size: 51.8 KB - Last synced at: over 2 years ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0

petteriTeikari/Modified-3D-UNet-Pytorch Fork of pykao/Modified-3D-UNet-Pytorch
This repository implements pytorch version of the modifed 3D U-Net from Fabian Isensee et al. participating in BraTS2017
Size: 33.2 KB - Last synced at: over 2 years ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0

petteriTeikari/DropoutUncertaintyExps Fork of yaringal/DropoutUncertaintyExps
Experiments used in "Dropout as a Bayesian Approximation: Representing Model Uncertainty in Deep Learning"
Language: Python - Size: 4.91 MB - Last synced at: over 2 years ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0
