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GitHub / pranathivemuri 4 repositories
research in computational biology
pranathivemuri/vessels-ct-radius
2D Skeleton of vessels and radius
Language: Python - Size: 516 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 6 - Forks: 4
pranathivemuri/hovernet_he
Language: Python - Size: 37 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 2 - Forks: 0
pranathivemuri/notion-backup Fork of darobin/notion-backup
Simple command to backup a Notion workspace
Size: 13.7 KB - Last synced: about 1 year ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0
pranathivemuri/cell-tracking
Language: Jupyter Notebook - Size: 39 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 3 - Forks: 0
pranathivemuri/data-version-control Fork of realpython/data-version-control
Size: 5.86 KB - Last synced: about 1 year ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0
pranathivemuri/hover_net Fork of vqdang/hover_net
Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.
Language: Python - Size: 37 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0
pranathivemuri/tflite-runtime Fork of iCorv/tflite-runtime
Compiled TensorFlow lite runtime. This interpreter-only package is a fraction the size of the full TensorFlow package and includes the bare minimum code required to run inferences with TensorFlow Lite—it includes only the tf.lite.Interpreter Python class. This small package is ideal when all you want to do is execute .tflite models and avoid wasting disk space with the large TensorFlow library.
Size: 8.71 MB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0
pranathivemuri/napari Fork of napari/napari
napari: a fast, interactive, multi-dimensional image viewer for python
Language: Python - Size: 22.5 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0
pranathivemuri/napari-animation Fork of napari/napari-animation
A napari plugin for making animations
Size: 831 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0
pranathivemuri/hovernet_inference Fork of simongraham/hovernet_inference
HoVer-Net inference code for simultaneous nuclear segmentation and classification
Language: Jupyter Notebook - Size: 28.4 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0
pranathivemuri/stardist Fork of stardist/stardist
StarDist - Object Detection with Star-convex Shapes
Size: 44.4 MB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
pranathivemuri/skeletonize
Language: Python - Size: 7.81 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 3 - Forks: 1
pranathivemuri/EndtoEnd---Predictive-modeling-using-Python Fork of Sundar0989/EndtoEnd---Predictive-modeling-using-Python
Size: 1.3 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0
pranathivemuri/Bite-sized-Machine-Learning Fork of lilly-chen/Bite-sized-Machine-Learning
Simple example to illustrate machine learning concept
Size: 1.23 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0
pranathivemuri/covid-if-annotations Fork of hci-unihd/covid-if-annotations
Annotation Tool for Immunofluorescence Assay Images
Size: 11.9 MB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0
pranathivemuri/Machine-Learning-with-Python Fork of susanli2016/Machine-Learning-with-Python
Python code for common Machine Learning Algorithms
Size: 40.2 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
pranathivemuri/amazon-sagemaker-examples Fork of aws/amazon-sagemaker-examples
Example notebooks that show how to apply machine learning and deep learning in Amazon SageMaker
Language: Jupyter Notebook - Size: 27.6 MB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0
pranathivemuri/rnaseq Fork of nf-core/rnaseq
RNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control
Language: Nextflow - Size: 49.7 MB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0
pranathivemuri/2020-04-17-czbiohub
Language: HTML - Size: 3.05 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0
pranathivemuri/JWave Fork of graetz23/JWave
A Discrete Fourier Transform (DFT), a Fast Wavelet Transform (FWT), and a Wavelet Packet Transform (WPT) algorithm in 1-D, 2-D, and 3-D using normalized orthogonal (orthonormal) Haar, Coiflet, Daubechie, Legendre and normalized biorthognal wavelets in Java.
Language: Java - Size: 1.52 MB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0
pranathivemuri/bioconda-recipes Fork of bioconda/bioconda-recipes
Conda recipes for the bioconda channel.
Language: Shell - Size: 242 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0
pranathivemuri/kmermaid Fork of nf-core/kmermaid
k-mer similarity analysis pipeline.
Language: Nextflow - Size: 9.19 MB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0
pranathivemuri/vispy-example-3d
numpy array volume viewer using vispy
Language: Python - Size: 73.2 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 1
pranathivemuri/markdown-cheatsheet Fork of tchapi/markdown-cheatsheet
Markdown Cheatsheet for Github Readme.md
Size: 12.7 KB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
pranathivemuri/test-datasets Fork of nf-core/test-datasets
Test data to be used for automated testing with the nf-core pipelines.
Size: 1.47 GB - Last synced: about 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0
pranathivemuri/Faster_RCNN_for_Open_Images_Dataset_Keras Fork of RockyXu66/Faster_RCNN_for_Open_Images_Dataset_Keras
Faster R-CNN for Open Images Dataset by Keras
Size: 16.4 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0
pranathivemuri/skeletonization Fork of 3Scan/3scan-skeleton
3D Image Skeletonization Tools
Language: Python - Size: 1.65 MB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0
pranathivemuri/image-segmentation-validation
This repo contains notebook showing grayscale to binary image segmentation and validation
Language: Jupyter Notebook - Size: 1.36 MB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 1 - Forks: 0
pranathivemuri/Floodfill
Language: Python - Size: 16.6 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0