quantori/quantori-pesn-python-sdk

Quantori Python SDK for PerkinElmer Signals Notebook

Language: Python - Size: 3.04 MB - Last synced: 12 days ago - Pushed: over 1 year ago - Stars: 11 - Forks: 1

quantori/GherkinSyncTool

Gherkin tests scenario synchronizer

Language: C# - Size: 621 KB - Last synced: 18 days ago - Pushed: 18 days ago - Stars: 21 - Forks: 0

quantori/prj-thunderstorm Fork of zitmen/thunderstorm

ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging

Language: Java - Size: 30.5 MB - Last synced: about 1 month ago - Pushed: 12 months ago - Stars: 0 - Forks: 1

quantori/Vina-GPU Fork of DeltaGroupNJUPT/Vina-GPU

A heterogeneous OpenCL implementation of AutoDock Vina

Language: C++ - Size: 38.1 MB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 0 - Forks: 1

quantori/VarDictJava Fork of AstraZeneca-NGS/VarDictJava

VarDict Java port

Size: 80.4 MB - Last synced: about 1 month ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

quantori/Quiz-Website Fork of C0venant/Quiz-Website

Size: 298 KB - Last synced: about 1 month ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0

quantori/skills-ml Fork of workforce-data-initiative/skills-ml

Data Processing and Machine learning methods for the Open Skills Project

Language: Jupyter Notebook - Size: 3.1 MB - Last synced: about 1 month ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

quantori/scip-dockinginterface

DockingInterface is a Python wrapper for open-source molecular docking programs: Autodock Vina, Smina, QVina2, and rDock.

Language: MATLAB - Size: 125 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

quantori/SciGlass Fork of epam/SciGlass

The database contains a vast set of data on the properties of glass materials.

Size: 800 KB - Last synced: about 1 month ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

quantori/SimdFlow

Code that helps to write logic based on SIMD operations

Language: C# - Size: 8.79 KB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

quantori/scip-rdock

rDock is a fast and versatile Open Source docking program that can be used to dock small molecules against proteins and nucleic acids. This fork adds changes to rDock that allow it to be a part of DockingFactory.

Language: C++ - Size: 19.9 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 2 - Forks: 1

quantori/structure-seer

The implementation, training and evaluation of a Structure Seer machine learning model designed for reconstruction of adjacency of a molecular graph from the labelling of its nodes.

Language: Python - Size: 43.2 MB - Last synced: about 1 month ago - Pushed: 5 months ago - Stars: 1 - Forks: 1

quantori/scip-vina

AutoDock Vina is one of the fastest and most widely used open-source docking engines. It is based on a simple scoring function and rapid gradient-optimization conformational search. It was originally designed and implemented by Dr. Oleg Trott in the Molecular Graphics Lab. This fork of Vina adds changes that allow it to be a part of DockingFactory.

Language: C++ - Size: 105 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

quantori/picard Fork of broadinstitute/picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Size: 166 MB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

quantori/scip-qvina

Quick Vina 2 is a fast and accurate molecular docking tool, attained at accurately accelerating AutoDock Vina. This fork of QVina 2 adds changes that allow it to run as part of DockingFactory.

Language: C++ - Size: 156 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

quantori/nsaph-platform-deployment Fork of NSAPH-Data-Platform/nsaph-platform-deployment

Deployment Descriptors and scripts for NSAPH Data Platform

Language: Shell - Size: 1.71 MB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

quantori/simd-extensions

Code that helps to write logic based on SIMD operations

Language: C# - Size: 8.79 KB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

quantori/scip-smina

Smina is fork of AutoDock Vina that is customized to better support scoring function development and high-performance energy minimization. smina is maintained by David Koes at the University of Pittsburgh and is not directly affiliated with the AutoDock project. This fork of Smina adds changes that allow it to run as a part of DockingFactory.

Language: C++ - Size: 2.84 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

quantori/OOP-3

OOP lection #3

Language: C# - Size: 3.46 MB - Last synced: about 1 month ago - Pushed: 12 months ago - Stars: 0 - Forks: 0

quantori/scip-dockingfactory

Docking Factory is a tool to automate molecular docking runs on an HPC cluster using the Dask framework. DockingFactory provides unified way of running molecular docking with different software backends: AutoDock Vina, Smina, Qvina2, and rDock.

Language: MATLAB - Size: 1.69 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

quantori/nsaph-gis Fork of NSAPH-Data-Platform/nsaph-gis

Miscellaneous utilities to work with geographies and geometry based on shape files.

Size: 44.9 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 0

quantori/nmslib Fork of nmslib/nmslib

Non-Metric Space Library (NMSLIB): An efficient similarity search library and a toolkit for evaluation of k-NN methods for generic non-metric spaces.

Size: 94.6 MB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

quantori/miew Fork of epam/miew

3D Molecular Viewer

Size: 61 MB - Last synced: about 1 month ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

quantori/nextflow Fork of nextflow-io/nextflow

A DSL for data-driven computational pipelines

Size: 34.1 MB - Last synced: about 1 month ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

quantori/MultiRef3D

SD-860

Language: Python - Size: 874 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

quantori/ketcher Fork of epam/ketcher

Web-based molecule sketcher

Language: JavaScript - Size: 5.75 MB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 1

quantori/k-NN Fork of opensearch-project/k-NN

🆕 Find the k-nearest neighbors (k-NN) for your vector data

Language: Java - Size: 32 MB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

quantori/indigo-node Fork of epam/indigo-node

NodeJS bindings for Indigo Universal Cheminformatics Toolkit

Size: 11 MB - Last synced: about 1 month ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

quantori/Indigo-ELN-v.-2.0 Fork of epam/Indigo-ELN-v.-2.0

Indigo - The Open-Source Chemistry Electronic Lab Notebook

Size: 170 MB - Last synced: about 1 month ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

quantori/Indigo Fork of epam/Indigo

Universal cheminformatics libraries, utilities and database search tools

Size: 102 MB - Last synced: about 1 month ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

quantori/imago-third-party

Language: C++ - Size: 20.5 MB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

quantori/COVID19-MA-Transmission

Language: Pascal - Size: 5.96 MB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

quantori/imago Fork of ggasoftware/imago

Imago OCR: chemical image recognition toolkit

Size: 31.9 MB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 0 - Forks: 1

quantori/htsjdk Fork of samtools/htsjdk

A Java API for high-throughput sequencing data (HTS) formats.

Size: 98.5 MB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

quantori/cwl-airflow Fork of Barski-lab/cwl-airflow

Python package to extend Airflow functionality with CWL1.1 support

Language: Python - Size: 2.77 MB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

quantori/adam Fork of bigdatagenomics/adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.

Language: Scala - Size: 11.6 MB - Last synced: about 1 month ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

quantori/COVID19-Ukraine-Transmission

Language: Pascal - Size: 5.25 MB - Last synced: about 1 month ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

quantori/FastqHeat

Python wrapper created to help download metagenomic data from SRA or ENA databases

Language: Python - Size: 273 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 0

quantori/DYRK1B

QSAR

Size: 6.84 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

quantori/async-couch Fork of symstu/async-couch

Asynchronous client for CouchDb for Python. Currently implemented base operations with indexes and documents

Language: Python - Size: 137 KB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

quantori/cloud-pipeline Fork of epam/cloud-pipeline

Cloud agnostic genomics analysis, scientific computation and storage platform

Size: 62.3 MB - Last synced: about 1 month ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

quantori/Quantori-Vertex-AI-Connectors

Size: 24.4 KB - Last synced: about 1 month ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

quantori/kifparser

SUO-KIF ontology parser

Language: Python - Size: 57.6 KB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 4 - Forks: 1

quantori/warp Fork of cramerlab/warp

Size: 4.64 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

quantori/tutorial-on-ML-for-microbiomics

Language: Jupyter Notebook - Size: 14.6 MB - Last synced: about 1 month ago - Pushed: 3 months ago - Stars: 0 - Forks: 1

quantori/qtr-fingerprint

Language: Jupyter Notebook - Size: 7.57 MB - Last synced: 6 days ago - Pushed: 7 days ago - Stars: 0 - Forks: 0

quantori/prj-covid-scoring

This repository is dedicated to the scoring of lung diseases, where we propose a two-step workflow used for segmentation and scoring of lung diseases, including COVID-19

Language: Python - Size: 51.3 MB - Last synced: about 1 month ago - Pushed: 2 months ago - Stars: 3 - Forks: 1

quantori/edema-quantification

This project is dedicated to the detection and classification of radiographic features associated with pulmonary edema

Language: Jupyter Notebook - Size: 95.1 MB - Last synced: about 1 month ago - Pushed: about 2 months ago - Stars: 3 - Forks: 1

quantori/BDD-training-repo-4thStream

A special repo for the QA Manual school at Quantori, 4th stream

Size: 124 KB - Last synced: about 1 month ago - Pushed: 8 months ago - Stars: 0 - Forks: 3

quantori/scip-dockingfactory-bundle

Docking Factory is a tool to automate molecular docking runs on an HPC cluster using the Dask framework. DockingFactory provides unified way of running molecular docking with different software backends: AutoDock Vina, Smina, Qvina2, and rDock.

Language: Python - Size: 95.7 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 2 - Forks: 0

quantori/CRISPRSeqSim

CRISPRSeqSim is a tool that simulates results of CRISPR/cas editing fragments target sequencing.

Language: Python - Size: 24.4 KB - Last synced: about 1 month ago - Pushed: 11 months ago - Stars: 0 - Forks: 0

quantori/Behavioral.Automation

Tool for UI test automation based on Selenium and Specflow within a BDD process.

Language: C# - Size: 1.04 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 10 - Forks: 20

quantori/nsaph-gridmet Fork of NSAPH-Data-Platform/nsaph-gridmet

Processing pipelines for gridMET data

Language: Common Workflow Language - Size: 229 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

quantori/nsaph-cms Fork of NSAPH-Data-Platform/nsaph-cms

Pipelines to process CMS data: Medicaid and Medicare

Language: Python - Size: 326 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

quantori/conqur

Language: Python - Size: 98.6 KB - Last synced: 14 days ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

quantori/nsaph-platform-docs Fork of NSAPH-Data-Platform/nsaph-platform-docs

Documentation for NSAPH Data Platform

Language: Shell - Size: 19 MB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

quantori/nsaph-core-platform Fork of NSAPH-Data-Platform/nsaph-core-platform

Core Data Platform providing generic infrastructure for data hosting and processing

Language: Python - Size: 1.62 MB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

quantori/nsaph-epa Fork of NSAPH-Data-Platform/nsaph-epa

Toolkit for downloading and preprocessing of data provided by EPA

Language: Python - Size: 136 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

quantori/nsaph-utils Fork of NSAPH-Data-Platform/nsaph-utils

Miscellaneous utilities for NSAPH data processing pipelines included in the data platform

Language: Python - Size: 344 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

quantori/nsaph-census Fork of NSAPH-Data-Platform/nsaph-census

Size: 6.49 MB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

quantori/med3web Fork of epam/mriviewer

Med3Web is a high performance web tool for advanced 2-D and 3-D medical visualizations.

Language: JavaScript - Size: 61.8 MB - Last synced: about 1 month ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 1

quantori/detectron2 Fork of facebookresearch/detectron2

Detectron2 is FAIR's next-generation platform for object detection, segmentation and other visual recognition tasks.

Size: 4.74 MB - Last synced: 26 days ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

quantori/Study-Tracker Fork of Decibel-Therapeutics/Study-Tracker

Study management software for lab-based research organizations

Language: CSS - Size: 1.83 MB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0