rodoyle/sbb-2015

SynBioBeta 2015 Talk

Language: CSS - Size: 2.11 MB - Last synced: 7 months ago - Pushed: about 9 years ago - Stars: 0 - Forks: 0

rodoyle/git-tags-py Fork of bmcorser/git-tags-py

CLI for managing release tags in a Git repository

Language: Python - Size: 132 KB - Last synced: over 1 year ago - Pushed: over 8 years ago - Stars: 0 - Forks: 0

rodoyle/github-rust Fork of GlenDC/github-rust

A Rust GitHub v3 API client.

Language: Rust - Size: 1 MB - Last synced: over 1 year ago - Pushed: over 8 years ago - Stars: 0 - Forks: 0

rodoyle/swipe Fork of torognes/swipe

Smith-Waterman database searches with inter-sequence SIMD parallelisation

Language: C++ - Size: 2.65 MB - Last synced: over 1 year ago - Pushed: over 8 years ago - Stars: 0 - Forks: 0

rodoyle/reveal-boilerplate Fork of caillou/reveal-boilerplate

Boilerplate for slides with reveal.js

Language: JavaScript - Size: 1.54 MB - Last synced: over 1 year ago - Pushed: almost 9 years ago - Stars: 0 - Forks: 0

rodoyle/BEETL Fork of BEETL/BEETL

BEETL

Language: C++ - Size: 2.5 MB - Last synced: over 1 year ago - Pushed: over 9 years ago - Stars: 0 - Forks: 0

rodoyle/biodata

Collection of biodata objects

Size: 93.8 KB - Last synced: over 1 year ago - Pushed: over 12 years ago - Stars: 1 - Forks: 0

rodoyle/GitPlasmidSCM

Experiment Using Git(Hub) to manage biologic sequence information and data

Size: 97.7 KB - Last synced: over 1 year ago - Pushed: over 12 years ago - Stars: 1 - Forks: 0

rodoyle/DNAPrinter

Develop code to parse DNA sequences for automated synthesis and assembly

Size: 85.9 KB - Last synced: over 1 year ago - Pushed: over 12 years ago - Stars: 1 - Forks: 0

rodoyle/tophat_cufflinks_rnaseq Fork of Al3n70rn/tophat_cufflinks_rnaseq

RNA-Seq Analysis Pipeline: Maps RNA-Seq data and assesses expression using Tophat and Cufflinks

Language: C++ - Size: 6.17 MB - Last synced: over 1 year ago - Pushed: over 10 years ago - Stars: 0 - Forks: 0

rodoyle/rust-openssl Fork of sfackler/rust-openssl

OpenSSL bindings for Rust

Size: 9.84 MB - Last synced: over 1 year ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

rodoyle/mongo-rust-driver Fork of appsignal/mongo-rust-driver

Mongo Rust driver built on top of the Mongo C driver

Language: Rust - Size: 206 KB - Last synced: over 1 year ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

rodoyle/open-guide-picker

Source Code for Guide Picker, In Press

Language: JavaScript - Size: 38.1 KB - Last synced: over 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

rodoyle/dgvue

Desktop Genetics Vue.js Template Application

Language: JavaScript - Size: 9.77 KB - Last synced: over 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

rodoyle/dgparse

Desktop Genetics Public Parser Library

Language: Python - Size: 3.34 MB - Last synced: over 1 year ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

rodoyle/dgcli

Command Line Client for DeskGen Platform

Language: Python - Size: 128 KB - Last synced: over 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

rodoyle/dotfiles

Dotfiles for Linux and OS X

Language: Vim script - Size: 33.2 KB - Last synced: over 1 year ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0

rodoyle/consul-rust Fork of pierresouchay/consul-rust

Rust client libray for Consul HTTP API

Language: Rust - Size: 85 KB - Last synced: over 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

rodoyle/prezto Fork of sorin-ionescu/prezto

Fork of prezto with local conf changes

Language: Shell - Size: 1.94 MB - Last synced: over 1 year ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

rodoyle/haystack

Searchable collections of items (haystacks) with a common interface

Language: Python - Size: 4.88 KB - Last synced: over 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

rodoyle/suffix Fork of BurntSushi/suffix

Fast suffix arrays for Rust (with Unicode support).

Language: Rust - Size: 162 KB - Last synced: over 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

rodoyle/ethflow

Smart Contract "tollbooth" with an "expensive" Airflow/TensorFlow Oracle

Size: 1.95 KB - Last synced: over 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

rodoyle/pyethapp Fork of ethereum/pyethapp

Language: Python - Size: 1.43 MB - Last synced: over 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

rodoyle/py-evm Fork of ethereum/py-evm

A Python implementation of the Ethereum Virtual Machine

Language: Python - Size: 1.3 MB - Last synced: over 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

rodoyle/GUIDES Fork of sanjanalab/GUIDES

A new workflow for the custom design of CRISPR libraries.

Language: OpenEdge ABL - Size: 28.5 MB - Last synced: over 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

rodoyle/big-search Fork of greglever/big-search

Case Study in Python searching datasets larger than RAM.

Language: Python - Size: 33.2 KB - Last synced: over 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

rodoyle/guide-cluster Fork of datadodo/guide-cluster

Guide RNA Clustering Example

Size: 26 MB - Last synced: over 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 1

rodoyle/PyVCF Fork of jamescasbon/PyVCF

A Variant Call Format reader for Python.

Language: Python - Size: 1.96 MB - Last synced: over 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

rodoyle/rust-bio Fork of rust-bio/rust-bio

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

Language: Rust - Size: 8.58 MB - Last synced: over 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

rodoyle/rust-htslib Fork of rust-bio/rust-htslib

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

Language: Rust - Size: 5.02 MB - Last synced: over 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

rodoyle/bowtie Fork of BenLangmead/bowtie

An ultrafast memory-efficient short read aligner

Language: C++ - Size: 23.1 MB - Last synced: over 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

rodoyle/salt Fork of saltstack/salt

Software to automate the management and configuration of any infrastructure or application at scale. Get access to the Salt Open software package repository here:

Language: Python - Size: 222 MB - Last synced: over 1 year ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

rodoyle/wrapup

Skeleton for wrapping a C/C++ Library in Python

Language: C++ - Size: 206 KB - Last synced: over 1 year ago - Pushed: over 9 years ago - Stars: 1 - Forks: 1

rodoyle/decks

Public RevealJS decks

Language: HTML - Size: 11.7 MB - Last synced: over 1 year ago - Pushed: about 8 years ago - Stars: 0 - Forks: 0

rodoyle/mal

Size: 13.7 KB - Last synced: over 1 year ago - Pushed: about 8 years ago - Stars: 0 - Forks: 0

rodoyle/cas-offinder Fork of snugel/cas-offinder

An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.

Language: C - Size: 199 KB - Last synced: over 1 year ago - Pushed: about 8 years ago - Stars: 0 - Forks: 0

rodoyle/Azimuth Fork of MicrosoftResearch/Azimuth

Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency

Language: Python - Size: 4.28 MB - Last synced: over 1 year ago - Pushed: about 8 years ago - Stars: 0 - Forks: 0

rodoyle/genome_ml

Genome Editing Machine Learning Repo

Language: CSS - Size: 7.93 MB - Last synced: over 1 year ago - Pushed: about 9 years ago - Stars: 1 - Forks: 0

rodoyle/pybwa Fork of lh3/bwa

BWA re-worked as a library, wrapped in Python

Language: C - Size: 1.5 MB - Last synced: over 1 year ago - Pushed: over 9 years ago - Stars: 0 - Forks: 0

rodoyle/sais Fork of davehughes/sais

Python wrapper around Yuta Mori's implementation of SA-IS suffix array construction.

Language: C - Size: 96.7 KB - Last synced: over 1 year ago - Pushed: over 9 years ago - Stars: 0 - Forks: 0

rodoyle/7wonders Fork of bmcorser/7wonders

The seven wonders of JavaScript

Language: JavaScript - Size: 81.1 KB - Last synced: over 1 year ago - Pushed: over 9 years ago - Stars: 0 - Forks: 0