GitHub / sitara-21 1 Repository
sitara-21/mutation_analysis
Performing Analysis on VCFs post mutation calling
Language: Jupyter Notebook - Size: 2.19 MB - Last synced at: 10 days ago - Pushed at: 11 days ago - Stars: 0 - Forks: 0
sitara-21/HaplotypeCaller
Pipeline to run HaplotypeCaller Mutation Caller
Language: Python - Size: 18.6 KB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 0 - Forks: 0
sitara-21/alignment
Align or Unalign files to a reference genome using GATK best practices
Language: Shell - Size: 12.7 KB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 0 - Forks: 0
sitara-21/mutect1
Pipeline to run Mutect1 Mutation Caller
Language: Shell - Size: 9.77 KB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 0 - Forks: 0
sitara-21/vardict
Pipeline to run VarDict Mutation Caller
Language: Perl - Size: 16.6 KB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 0 - Forks: 0
sitara-21/Multiple-Instance-Learning
MIL to classify samples using fragments
Language: Python - Size: 61.5 KB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 0 - Forks: 0
sitara-21/Read-GCP-RemoteVM
Guide to streaming files in GCP bucket from ERIS Cluster for downstream processing
Language: Python - Size: 11.7 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0