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GitHub / trackmate-sc 12 repositories
TrackMate is your buddy for everyday tracking.
trackmate-sc/TrackMate-Cellpose
Tentative Cellpose integration in TrackMate.
Language: Java - Size: 367 KB - Last synced: 6 days ago - Pushed: 6 days ago - Stars: 4 - Forks: 3
trackmate-sc/TrackMate
TrackMate is your buddy for your everyday tracking.
Language: Java - Size: 11.9 MB - Last synced: 4 days ago - Pushed: 6 days ago - Stars: 148 - Forks: 73
trackmate-sc/MaMuT
The fiji plugin for Massive Annotation
Language: Java - Size: 2.22 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 6 - Forks: 6
trackmate-sc/MaMuT-tutorials
Repository for the source files used to generate the MaMuT tutorials, following Tobias Pietzsch architecture.
Language: TeX - Size: 11.5 MB - Last synced: 2 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0
trackmate-sc/TrackMate-StarDist
StarDist detection as TrackMate detectors.
Language: Java - Size: 533 KB - Last synced: 2 months ago - Pushed: 6 months ago - Stars: 7 - Forks: 2
trackmate-sc/TrackMate-examples
A simple repository that shows how to extend TrackMate with your own modules.
Language: Java - Size: 122 KB - Last synced: 2 months ago - Pushed: over 1 year ago - Stars: 2 - Forks: 9
trackmate-sc/DendriteDynamicsTracker
A Fiji plugin to track the dynamics of dendrites in 2D time-lapse movies.
Language: Java - Size: 193 KB - Last synced: 2 months ago - Pushed: 7 months ago - Stars: 2 - Forks: 0
trackmate-sc/TrackMate-CSVImporter
An importer for CSV files in TrackMate.
Language: Java - Size: 296 KB - Last synced: 2 months ago - Pushed: about 1 year ago - Stars: 2 - Forks: 0
trackmate-sc/TrackMate-Oneat
TrackMate extension for oneat for verifying lineage trees
Language: Java - Size: 431 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 3 - Forks: 0
trackmate-sc/TrackMate-Skeleton
TrackMate module for skeletonization of tissue end points and tracking
Language: Java - Size: 133 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0
trackmate-sc/.github
TrackMate organization profile
Size: 2.93 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
trackmate-sc/TrackMate-Weka
Using a Weka classifier as detector for TrackMate.
Language: Java - Size: 276 KB - Last synced: 25 days ago - Pushed: 26 days ago - Stars: 1 - Forks: 0
trackmate-sc/TrackMate-MorphoLibJ
TrackMate detector based on the watershed segmentation tool in the MorphoLibJ plugin.
Language: Java - Size: 1.87 MB - Last synced: 2 months ago - Pushed: 6 months ago - Stars: 3 - Forks: 0
trackmate-sc/TrackMate-Ilastik
Using Ilastik pixel classifiers as detector for TrackMate.
Language: Java - Size: 913 KB - Last synced: 25 days ago - Pushed: 26 days ago - Stars: 1 - Forks: 1
trackmate-sc/trackmate-core
Core library for TrackMate applications. Ship basic data structures and algorithms.
Language: Java - Size: 285 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
trackmate-sc/TrackMate-ExTrack
Perform ExTrack computation in TrackMate.
Language: Java - Size: 523 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
trackmate-sc/TrackMate-CTCRunner
Batch measurements of the Cell-Tracking-Challenge metrics using TrackMate.
Language: Java - Size: 817 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 1