virtool/virtool-cli

A command line interface for working with Virtool data

Language: Python - Size: 16.1 MB - Last synced: 8 days ago - Pushed: 8 days ago - Stars: 1 - Forks: 9

virtool/virtool-core

Core utilities for Virtool and associated packages

Language: Python - Size: 68.3 MB - Last synced: 8 days ago - Pushed: 8 days ago - Stars: 3 - Forks: 11

virtool/virtool-ui

The browser frontend for Virtool

Language: TypeScript - Size: 7.49 MB - Last synced: about 9 hours ago - Pushed: about 12 hours ago - Stars: 4 - Forks: 7

virtool/virtool

Viral infection diagnostics using next-generation sequencing

Language: Python - Size: 375 MB - Last synced: 8 days ago - Pushed: 8 days ago - Stars: 43 - Forks: 24

virtool/workflow-pathoscope

A workflow for detecting known viruses in Virtool

Language: Python - Size: 75.8 MB - Last synced: 1 day ago - Pushed: 2 days ago - Stars: 3 - Forks: 7

virtool/workflow-create-subtraction

A workflow for creating Virtool subtractions

Language: Python - Size: 34.2 MB - Last synced: 2 days ago - Pushed: 3 days ago - Stars: 1 - Forks: 7

virtool/workflow-build-index

A workflow for building Virtool reference indexes

Language: Python - Size: 188 KB - Last synced: 2 days ago - Pushed: 3 days ago - Stars: 1 - Forks: 6

virtool/workflow-create-sample

A workflow for creating Virtool samples

Language: Python - Size: 248 KB - Last synced: 2 days ago - Pushed: 3 days ago - Stars: 1 - Forks: 7

virtool/dev

Developer tooling for Virtool.

Language: Python - Size: 83 KB - Last synced: 22 days ago - Pushed: 22 days ago - Stars: 2 - Forks: 5

virtool/virtool-workflow

A framework for building Virtool workflows

Language: Python - Size: 290 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 3 - Forks: 11

virtool/.github

Size: 5.86 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0

virtool/virtool.ca

The new website for Virtool

Language: MDX - Size: 18.4 MB - Last synced: 30 days ago - Pushed: about 1 month ago - Stars: 2 - Forks: 6

virtool/external-tools

Language: Dockerfile - Size: 5.86 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 1 - Forks: 1

virtool/uploader

Language: Python - Size: 0 Bytes - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0

virtool/tools

Language: HTML - Size: 173 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 0

virtool/workflow-iimi

A workflow for detecting known viruses using ML in Virtool

Language: HTML - Size: 435 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 1 - Forks: 2

virtool/ml-plant-viruses

A machine learning model for detecting plant viruses.

Size: 0 Bytes - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 1 - Forks: 0

virtool/virtool-website 📦

The Virtool product website

Language: Sass - Size: 55.1 MB - Last synced: 7 months ago - Pushed: almost 2 years ago - Stars: 4 - Forks: 9

virtool/ref-plant-viruses

An official Virtool reference for plant viruses

Size: 25.3 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 1 - Forks: 3

virtool/workflow-aodp

A workflow for using amplicon analysis in Virtool using AODP

Language: Python - Size: 21.5 KB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 0 - Forks: 3

virtool/compose

Language: Python - Size: 21.5 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 2 - Forks: 1

virtool/virtool-contrib-guide 📦

Size: 9.77 KB - Last synced: about 1 year ago - Pushed: almost 6 years ago - Stars: 1 - Forks: 1

virtool/virtool-database 📦

An official virus reference database for Virtool

Language: Python - Size: 25 MB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 1 - Forks: 0

virtool/workflow-nuvs

A workflow for identifying novel viruses in Virtool

Language: Python - Size: 75.6 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 2 - Forks: 8

virtool/virtool-hmm

Profile HMMs and annotations for Virtool and NuVs

Language: Python - Size: 79.4 MB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 2 - Forks: 0

virtool/virtool-maintenance

Language: CSS - Size: 186 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

virtool/workflow-tools

A Docker image with bioinformatics tools used by virtool-workflow

Language: Dockerfile - Size: 9.77 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 1 - Forks: 1

virtool/virtool-migration

Alembic migrations for Virtool

Language: Python - Size: 78.1 KB - Last synced: about 1 year ago - Pushed: about 1 year ago - Stars: 1 - Forks: 1

virtool/virtool-ws

Websocket service for Virtool

Language: Python - Size: 81.1 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 1

virtool/pyfixtures

Pytest style fixtures outside of Pytest

Language: Python - Size: 68.4 KB - Last synced: 23 days ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 0

virtool/hmm-viruses

HMM data for predicting novel viruses

Size: 1000 Bytes - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 1 - Forks: 0