wells-wood-research/isambard Fork of isambard-uob/isambard

Intelligent System for Analysis, Model Building And Rational Design of biomolecules.

Language: Python - Size: 8.21 MB - Last synced: about 8 hours ago - Pushed: about 9 hours ago - Stars: 1 - Forks: 0

wells-wood-research/de-stress

DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.

Language: Elm - Size: 21.9 MB - Last synced: 19 days ago - Pushed: 19 days ago - Stars: 16 - Forks: 1

wells-wood-research/timed-design

Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis

Language: Python - Size: 31.4 MB - Last synced: 20 days ago - Pushed: 20 days ago - Stars: 42 - Forks: 10

wells-wood-research/aposteriori

DNN based protein design.

Language: Python - Size: 32.2 MB - Last synced: 26 days ago - Pushed: 26 days ago - Stars: 7 - Forks: 2

wells-wood-research/TTSCP_L102C_DSB-MBnThz-vs-TTSCP_L102C_DDSB-MBnThz

Language: Python - Size: 9.15 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 1 - Forks: 0

wells-wood-research/org_classification_destress

Size: 0 Bytes - Last synced: about 1 month ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

wells-wood-research/PDBench

PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.

Language: Python - Size: 93.8 MB - Last synced: 20 days ago - Pushed: over 1 year ago - Stars: 26 - Forks: 0

wells-wood-research/biomolecules.mojo

An experimental library for working with biomolecular data in Mojo.

Size: 2.93 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0

wells-wood-research/oshea-j-wood-c-pbp-design-2023

Language: Jupyter Notebook - Size: 57.2 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 0 - Forks: 0

wells-wood-research/ProteinMPNN_custom_training

Scripts for training ProteinMPNN with a custom dataset and other utils

Language: Shell - Size: 84.6 MB - Last synced: 20 days ago - Pushed: 8 months ago - Stars: 0 - Forks: 0

wells-wood-research/BAlaS

Source code for the BUDE Alanine Scan web application.

Language: Elm - Size: 4.05 MB - Last synced: 8 months ago - Pushed: about 3 years ago - Stars: 6 - Forks: 2

wells-wood-research/pdb-compare

Language: Jupyter Notebook - Size: 3.62 MB - Last synced: 20 days ago - Pushed: 7 months ago - Stars: 0 - Forks: 0

wells-wood-research/stam-m-wood-c-de-stress-2021

Language: Python - Size: 38.8 MB - Last synced: over 1 year ago - Pushed: almost 3 years ago - Stars: 1 - Forks: 0

wells-wood-research/oshea-j-interface-engineering-2021

Language: DIGITAL Command Language - Size: 18.3 MB - Last synced: over 1 year ago - Pushed: about 3 years ago - Stars: 2 - Forks: 0

wells-wood-research/alphafold2-multiprocessing

Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing

Language: Python - Size: 21.5 KB - Last synced: 20 days ago - Pushed: almost 3 years ago - Stars: 22 - Forks: 1

wells-wood-research/galloway-jg-hairpin-self-assembly-2020

Scripts and data for running particle analysis on AFM data

Language: Jupyter Notebook - Size: 82.1 MB - Last synced: over 1 year ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 0

wells-wood-research/ampal Fork of isambard-uob/ampal

A simple, intuitive and Pythonic framework for representing biomolecular structure.

Language: HTML - Size: 2.56 MB - Last synced: over 1 year ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

wells-wood-research/wells-wood-research.github.io

Group website.

Language: Elm - Size: 3.99 MB - Last synced: over 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

wells-wood-research/pollen

Language: Jupyter Notebook - Size: 18.1 MB - Last synced: over 1 year ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 1

wells-wood-research/elm-molecules

An Elm package for working with molecular structure.

Language: Elm - Size: 10.7 KB - Last synced: 10 months ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 0

wells-wood-research/ccbuilder2 Fork of woolfson-group/ccbuilder2

A web application for atomistic modelling of coiled coils and collagens.

Size: 9.31 MB - Last synced: over 1 year ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0