yufree/hjhbb

公众号 环境黑板报 的文章存档

Language: TeX - Size: 656 MB - Last synced: 11 days ago - Pushed: 11 days ago - Stars: 7 - Forks: 3

yufree/pmd

Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis

Language: R - Size: 78.7 MB - Last synced: 12 days ago - Pushed: 13 days ago - Stars: 9 - Forks: 0

yufree/rmwf

Reproducilble Metabolomics Workflow

Language: R - Size: 527 MB - Last synced: 22 days ago - Pushed: 22 days ago - Stars: 7 - Forks: 2

yufree/yufree.cn

yufree's personal website

Language: HTML - Size: 883 MB - Last synced: 21 days ago - Pushed: 21 days ago - Stars: 39 - Forks: 17

yufree/x13cms

Language: R - Size: 133 KB - Last synced: 22 days ago - Pushed: 22 days ago - Stars: 1 - Forks: 0

yufree/apLCMS

fork from https://sourceforge.net/projects/aplcms/?source=navbar

Language: R - Size: 26.9 MB - Last synced: 28 days ago - Pushed: 29 days ago - Stars: 3 - Forks: 1

yufree/xcmsrocker

Rocker image for metabolomics data analysis

Language: HTML - Size: 1000 KB - Last synced: about 2 months ago - Pushed: 3 months ago - Stars: 12 - Forks: 3

yufree/SimpleITKRInstaller Fork of SimpleITK/SimpleITKRInstaller

Devtools based installer for SimpleITK R installer.

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yufree/metaworkflow

Online workflow guidelines for metabolomics

Language: TeX - Size: 33.2 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 23 - Forks: 10

yufree/daily

News/Blog aggregator website for R

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yufree/yufree.github.com

index of blog

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yufree/xMSanalyzer

fork from https://sourceforge.net/projects/xmsanalyzer/

Language: R - Size: 542 KB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 3 - Forks: 1

yufree/shinyBDE

Language: R - Size: 2.02 MB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

yufree/gemini-pro-chat

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yufree/RAMClustR Fork of cbroeckl/RAMClustR

Assigning precursor-product ion relationships in indiscriminant MS/MS data

Language: R - Size: 5.61 MB - Last synced: about 2 months ago - Pushed: over 8 years ago - Stars: 0 - Forks: 0

yufree/RepData_PeerAssessment1 Fork of rdpeng/RepData_PeerAssessment1

Peer Assessment 1 for Reproducible Research

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yufree/PugetSound

PCB data analysis

Language: R - Size: 12.3 MB - Last synced: about 2 months ago - Pushed: almost 10 years ago - Stars: 0 - Forks: 0

yufree/ProgrammingAssignment2 Fork of rdpeng/ProgrammingAssignment2

Repository for Programming Assignment 2 for R Programming on Coursera

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yufree/presentation

my presentation for conference

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yufree/leekasso Fork of jtleek/leekasso

Code for comparing the top 10 predictors to the lasso/debiased lasso

Language: R - Size: 349 KB - Last synced: about 2 months ago - Pushed: over 10 years ago - Stars: 0 - Forks: 1

yufree/hugo-lithium-theme Fork of yihui/hugo-lithium

Lithium - A simple responsive Hugo theme

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yufree/GCDAssessments

Language: R - Size: 238 KB - Last synced: about 2 months ago - Pushed: about 10 years ago - Stars: 0 - Forks: 0

yufree/ExData_Plotting1 Fork of rdpeng/ExData_Plotting1

Plotting Assignment 1 for Exploratory Data Analysis

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yufree/democode

some common code

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yufree/datasharing Fork of jtleek/datasharing

The Leek group guide to data sharing

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yufree/courses Fork of DataScienceSpecialization/courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

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yufree/Cardinal Fork of kuwisdelu/Cardinal

Mass spectrometry imaging tools

Language: C - Size: 7.05 MB - Last synced: about 2 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

yufree/blog

English blog repo

Language: CSS - Size: 2.94 MB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

yufree/xMSannotator

fork from https://sourceforge.net/projects/xmsannotator/

Language: R - Size: 27.9 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 9 - Forks: 13

yufree/sciguide

现代科研指北

Language: R - Size: 83.2 MB - Last synced: about 2 months ago - Pushed: 10 months ago - Stars: 182 - Forks: 35

yufree/cosx.org Fork of cosname/cosx.org

统计之都主站

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yufree/lifeguide

自然生活的数学原理

Language: HTML - Size: 23.5 MB - Last synced: about 2 months ago - Pushed: 2 months ago - Stars: 5 - Forks: 1

yufree/pmdda

reproducible repo for PMDDA paper

Language: HTML - Size: 1.25 GB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 5 - Forks: 1

yufree/enet

network analysis for exposure study

Language: R - Size: 3.53 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 2 - Forks: 0

yufree/mdaw

Metabolomics Data Analysis Workshop slides

Language: JavaScript - Size: 898 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 5 - Forks: 0

yufree/metaRSS

RSS for metabolomics research

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yufree/mzrtsim

Raw data and peaks list simulation for GC/LC-MS based data

Language: R - Size: 36.4 MB - Last synced: about 2 months ago - Pushed: 3 months ago - Stars: 4 - Forks: 1

yufree/enviGCMS

GC/LC-MS data analysis for environmental science

Language: R - Size: 175 MB - Last synced: 15 days ago - Pushed: 9 months ago - Stars: 15 - Forks: 6

yufree/HiTMaP Fork of MASHUOA/HiTMaP

An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics

Language: R - Size: 99.2 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

yufree/magiceyer

Creat Autostereograms in R

Language: C++ - Size: 722 KB - Last synced: about 2 months ago - Pushed: about 4 years ago - Stars: 1 - Forks: 0

yufree/ISLRchnotes

ISLR中文笔记

Language: HTML - Size: 12.5 MB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 44 - Forks: 14

yufree/datadown

数据分析残卷

Language: R - Size: 139 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 17 - Forks: 7

yufree/MOOC

My MOOC notes

Size: 2.12 MB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 46 - Forks: 8

yufree/notes

笔记库

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yufree/dartms

Direct Analysis in Real Time (DART) Mass Spectrometry Data Analysis

Language: R - Size: 8.79 KB - Last synced: about 2 months ago - Pushed: about 6 years ago - Stars: 1 - Forks: 1

yufree/SWATHtoMRM

SWATHtoMRM package download from http://www.metabolomics-shanghai.org/softwaredetail.php?id=128

Language: R - Size: 17.6 KB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 1 - Forks: 0

yufree/scifetch

webpage crawling tools for pubmed, google scholar and rss

Language: R - Size: 44.9 KB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 13 - Forks: 5

yufree/timsconvert Fork of gtluu/timsconvert

Language: Python - Size: 47.1 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 1

yufree/drat Fork of drat-base/drat

Sample drat repository for easy forking and bootstrapping

Size: 55.7 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

yufree/expodb

Database and processing script related to exposure

Language: Python - Size: 209 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 4

yufree/rgabriel

Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot

Language: R - Size: 3.41 MB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 1 - Forks: 0

yufree/rmarkdown Fork of rstudio/rmarkdown

Dynamic Documents for R

Language: R - Size: 119 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

yufree/bookdown Fork of rstudio/bookdown

Authoring Books and Technical Documents with R Markdown

Language: JavaScript - Size: 17.8 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

yufree/ADAEPVchnotes

Advanced Data Analysis from an Elementary Point of View 中文笔记

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yufree/easyPubMed Fork of cran/easyPubMed

:exclamation: This is a read-only mirror of the CRAN R package repository. easyPubMed — Search and Retrieve Scientific Publication Records from PubMed

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yufree/CutoffOpt Fork of krumsieklab/CutoffOpt

Prior-knowledge-based cutoff optimization for correlation networks (code supplement for doi:10.1038/s41467-020-18675-3)

Size: 95.7 KB - Last synced: about 2 months ago - Pushed: over 3 years ago - Stars: 1 - Forks: 0

yufree/MetaboDIA

Fork from https://sourceforge.net/projects/metabodia/

Language: R - Size: 286 KB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 1 - Forks: 0

yufree/MDPlotR Fork of WBS-TW/MDPlotR

Using Shiny to analyze MS data by mass defect plots

Language: R - Size: 289 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 0

yufree/yufree

Size: 3.91 KB - Last synced: about 2 months ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

yufree/Autotuner Fork of KujawinskiLaboratory/Autotuner

This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics data processing.

Language: R - Size: 96.4 MB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

yufree/hugo-xmag Fork of yihui/hugo-xmag

A minimal magazine theme for Hugo

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yufree/emphtest

Template for personal academy website

Language: HTML - Size: 339 KB - Last synced: about 2 months ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

yufree/xsetplus

Language: R - Size: 72.4 MB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 1

yufree/expochallenge

Script for expochallenge

Language: HTML - Size: 16.1 MB - Last synced: about 2 months ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

yufree/ExposomeDataChallenge2021 Fork of isglobal-exposomeHub/ExposomeDataChallenge2021

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yufree/nlpshiny

For Data Science Capstone

Language: R - Size: 7.14 MB - Last synced: about 2 months ago - Pushed: over 9 years ago - Stars: 6 - Forks: 12

yufree/ghactions Fork of maxheld83/ghactions

GitHub actions for R and accompanying R package

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yufree/r-actions-test Fork of jimhester/r-actions-test

Size: 85.9 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

yufree/spicpms

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yufree/realism

For Valentine's Day

Language: R - Size: 6.84 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

yufree/MIR

find the application here: https://yufree.shinyapps.io/MIRtools/

Language: R - Size: 129 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

yufree/journaltone

online apps to explore scientific literature

Language: HTML - Size: 8.79 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 3 - Forks: 0

yufree/decoMS2

copy from http://pattilab.wustl.edu/software/decoms2/decoms2.php

Language: R - Size: 6.93 MB - Last synced: about 2 months ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

yufree/mz.unity Fork of nathaniel-mahieu/mz.unity

mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data

Language: R - Size: 2.29 MB - Last synced: about 2 months ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

yufree/FAMT Fork of cran/FAMT

:exclamation: This is a read-only mirror of the CRAN R package repository. FAMT — Factor Analysis for Multiple Testing (FAMT) : simultaneous tests<U+000a>under dependence in high-dimensional data. Homepage: http://famt.free.fr/

Language: R - Size: 6.27 MB - Last synced: about 2 months ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

yufree/rfigshare Fork of ropensci-archive/rfigshare

Programmatic interface for Figshare

Language: R - Size: 1.13 MB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

yufree/MetDIA

Download from https://omictools.com/metdia-tool and software developed by Zhu Research Group

Language: R - Size: 183 KB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 2

yufree/restez Fork of ropensci/restez

:sleeping: :open_file_folder: Create and Query a Local Copy of GenBank in R

Language: R - Size: 9.99 MB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

yufree/liftr Fork of nanxstats/liftr

Containerize R Markdown Documents for Continuous Reproducibility

Language: R - Size: 710 KB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

yufree/XMLSchema Fork of omegahat/XMLSchema

R package to work with XML Schema

Language: R - Size: 355 KB - Last synced: about 2 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

yufree/SSOAP Fork of cran/SSOAP

Client-side SOAP access for S

Language: R - Size: 352 KB - Last synced: about 2 months ago - Pushed: about 10 years ago - Stars: 0 - Forks: 0

yufree/bookdown.org Fork of rstudio/bookdown.org

Source documents to generate the bookdown.org website

Language: R - Size: 2.83 MB - Last synced: about 2 months ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

yufree/RRmix Fork of salernos/RRmix

Language: R - Size: 2.06 MB - Last synced: about 2 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

yufree/xcmsplus

shiny application for gc/lc-ms peaks list profiles

Language: R - Size: 6.94 MB - Last synced: about 2 months ago - Pushed: about 6 years ago - Stars: 0 - Forks: 1

yufree/rticles Fork of rstudio/rticles

LaTeX Journal Article Templates for R Markdown

Language: TeX - Size: 3.35 MB - Last synced: about 2 months ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

yufree/Chinese-Beamer-Using-Rmarkdown

Language: TeX - Size: 183 KB - Last synced: about 2 months ago - Pushed: almost 8 years ago - Stars: 0 - Forks: 3

yufree/twitter-blogdown Fork of yihui/mastodon-blogdown

Fetch Twitter messages daily and turn them into a website based on blogdown

Language: HTML - Size: 535 KB - Last synced: about 2 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

yufree/MSCCP

Online shiny apps for quantitative analysis of Short Chain Chlorinated Paraffins (SCCPs)

Language: R - Size: 288 MB - Last synced: about 2 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

yufree/isva Fork of cran/isva

:exclamation: This is a read-only mirror of the CRAN R package repository. isva — Independent Surrogate Variable Analysis

Language: R - Size: 1020 KB - Last synced: about 2 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

yufree/BatchQC Fork of mani2012/BatchQC

Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.

Language: HTML - Size: 23.5 MB - Last synced: about 2 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

yufree/x13cmsplus

shiny application for xcmsSet objects to perform stable isotope labeled based metabolomics

Language: R - Size: 1000 Bytes - Last synced: about 2 months ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

yufree/msdk Fork of msdk/msdk

MSDK source code repository

Language: Java - Size: 125 MB - Last synced: about 2 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

yufree/OrgMassSpecR Fork of OrgMassSpec/OrgMassSpecR

Organic/biological mass spectrometry data analysis (development version).

Language: R - Size: 2.29 MB - Last synced: about 2 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

yufree/powercal

code from Gscorreia89

Language: Matlab - Size: 134 KB - Last synced: about 2 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

yufree/bookdown-minimal Fork of yihui/bookdown-minimal

An absolutely minimal bookdown example

Size: 1.95 KB - Last synced: about 2 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

yufree/mummichog

software from http://clinicalmetabolomics.org/init/default/software

Language: Python - Size: 2 MB - Last synced: about 2 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

yufree/study

script for research

Language: R - Size: 9.77 KB - Last synced: about 2 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

yufree/MAIT Fork of jpgroup/MAIT

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/MAIT.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=MAIT.

Language: R - Size: 2.14 MB - Last synced: about 2 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

yufree/sva-devel Fork of jtleek/sva-devel

Language: R - Size: 344 KB - Last synced: about 2 months ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

yufree/blogcn

Chinese blog repo

Language: HTML - Size: 24.6 MB - Last synced: about 2 months ago - Pushed: about 7 years ago - Stars: 1 - Forks: 0