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GitHub / 3DGenomes / binless
Resolution-independent normalization of Hi-C data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/3DGenomes%2Fbinless
Stars: 7
Forks: 2
Open Issues: 5
License: lgpl-3.0
Language: C++
Repo Size: 558 MB
Dependencies:
15
Created: almost 8 years ago
Updated: 7 months ago
Last pushed: almost 5 years ago
Last synced: about 2 months ago
Topics: binless, cpp11, fused-lasso, generalized-additive-models, hi-c, high-throughput-sequencing, normalization, r, rcpp
Files
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Readme
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Dependencies
binless/DESCRIPTION
cran
- R >= 3.0.2 depends
- Rcpp >= 0.11.0 depends
- RcppEigen * depends
- Hmisc * imports
- MASS * imports
- Matrix * imports
- data.table >= 1.9.6 imports
- doParallel * imports
- dplyr * imports
- foreach * imports
- ggplot2 * imports
- matrixStats * imports
- quadprog * imports
- scales * imports
- utils * imports