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GitHub / AndreCNF / tcga-cancer-classification
A deep learning approach to classify cancer type from TCGA data.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AndreCNF%2Ftcga-cancer-classification
Stars: 1
Forks: 1
Open Issues: 14
License: None
Language: Jupyter Notebook
Repo Size: 1.96 MB
Dependencies:
262
Created: over 4 years ago
Updated: almost 3 years ago
Last pushed: over 1 year ago
Last synced: about 1 year ago
Files
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Readme
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Dependencies
requirements.txt
pypi
- Babel ==2.7.0
- Click ==7.0
- GitPython ==3.0.5
- HeapDict ==1.0.1
- Jinja2 ==2.11.1
- Mako ==1.1.0
- Markdown ==3.1.1
- MarkupSafe ==1.1.1
- PyYAML ==5.3
- Pygments ==2.4.2
- Send2Trash ==1.5.0
- Sphinx ==2.2.1
- alabaster ==0.7.12
- appnope ==0.1.0
- args ==0.1.0
- astroid ==2.3.3
- astunparse ==1.6.3
- attrs ==19.3.0
- autopep8 ==1.4.4
- backcall ==0.1.0
- bleach ==3.1.0
- certifi ==2019.11.28
- chardet ==3.0.4
- clint ==0.5.1
- cloudpickle ==1.2.2
- colorama ==0.4.3
- colorlover ==0.3.0
- colour ==0.1.5
- comet-git-pure ==0.19.14
- comet-ml ==2.0.18
- configobj ==5.0.6
- cycler ==0.10.0
- dask ==2.10.1
- data-utils ==0.1.0
- decorator ==4.4.0
- defusedxml ==0.6.0
- distributed ==2.10.0
- docutils ==0.15.2
- entrypoints ==0.3
- everett ==1.0.2
- falcon ==2.0.0
- fastparquet ==0.3.2
- filelock ==3.0.12
- floyd-cli ==0.11.17
- fsspec ==0.6.2
- funcsigs ==1.0.2
- geojson ==2.5.0
- gitdb2 ==2.0.6
- htmlmin ==0.1.12
- hug ==2.6.0
- idna ==2.8
- imagesize ==1.1.0
- importlib-metadata ==1.5.0
- ipykernel ==5.1.2
- ipython ==7.8.0
- ipython-genutils ==0.2.0
- ipywidgets ==7.5.1
- isort ==4.3.21
- jedi ==0.15.1
- joblib ==0.14.1
- jsmin ==2.2.2
- json5 ==0.8.5
- jsonschema ==3.0.2
- jupyter-client ==5.3.4
- jupyter-core ==4.6.1
- jupyterlab ==1.2.3
- jupyterlab-server ==1.0.6
- kiwisolver ==1.1.0
- lazy-object-proxy ==1.4.3
- livereload ==2.6.1
- llvmlite ==0.31.0
- lxml ==4.5.0
- marshmallow ==2.20.5
- matplotlib ==3.1.2
- mccabe ==0.6.1
- mistune ==0.8.4
- mkdocs ==1.0.4
- mkdocs-material ==4.5.0
- mkdocs-minify-plugin ==0.2.1
- modin ==0.7.0
- more-itertools ==8.2.0
- mpld3 ==0.3
- msgpack ==0.6.2
- nbconvert ==5.6.1
- nbformat ==4.4.0
- netifaces ==0.10.9
- notebook ==6.0.2
- numba ==0.48.0
- numpy ==1.18.1
- nvidia-ml-py3 ==7.352.0
- packaging ==20.1
- pandas ==0.25.3
- pandocfilters ==1.4.2
- parso ==0.5.1
- pathlib2 ==2.3.5
- pdoc3 ==0.7.2
- pdocs ==1.0.1
- pep562 ==1.0
- pexpect ==4.7.0
- pickleshare ==0.7.5
- pixiedust ==1.1.18
- plotly ==4.5.0
- pluggy ==0.13.1
- portray ==1.3.1
- prometheus-client ==0.7.1
- prompt-toolkit ==2.0.9
- protobuf ==3.11.2
- psutil ==5.6.7
- ptyprocess ==0.6.0
- py ==1.8.1
- pycodestyle ==2.5.0
- pylint ==2.4.4
- pymdown-extensions ==6.2
- pyparsing ==2.4.6
- pyrsistent ==0.15.7
- pytest ==5.3.5
- python-dateutil ==2.8.1
- pytz ==2019.3
- pyzmq ==18.1.0
- raven ==6.10.0
- ray ==0.8.1
- redis ==3.4.1
- requests ==2.22.0
- requests-toolbelt ==0.9.1
- retrying ==1.3.3
- scikit-learn ==0.22.1
- scipy ==1.4.1
- shap ==0.34.0
- six ==1.14.0
- sklearn ==0.0
- smmap2 ==2.0.5
- snowballstemmer ==2.0.0
- sortedcontainers ==2.1.0
- sphinxcontrib-applehelp ==1.0.1
- sphinxcontrib-devhelp ==1.0.1
- sphinxcontrib-htmlhelp ==1.0.2
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.2
- sphinxcontrib-serializinghtml ==1.1.3
- tabulate ==0.8.6
- tblib ==1.6.0
- terminado ==0.8.3
- testpath ==0.4.4
- thrift ==0.13.0
- toml ==0.10.0
- toolz ==0.10.0
- torch ==1.4.0
- tornado ==6.0.3
- tqdm ==4.42.0
- traitlets ==4.3.2
- typed-ast ==1.4.0
- urllib3 ==1.25.8
- wcwidth ==0.1.8
- webencodings ==0.5.1
- websocket-client ==0.57.0
- widgetsnbextension ==3.5.1
- wrapt ==1.11.2
- wurlitzer ==2.0.0
- xgboost ==0.90
- yaspin ==0.15.0
- zict ==1.0.0
- zipp ==2.1.0
setup.py
pypi
- comet-ml ==2.
- configobj ==5.
- dask ==2.
- data-utils *
- distributed ==2.
- fastparquet ==0.
- fsspec ==0.
- jinja2 ==2.
- joblib ==0.
- matplotlib ==3.
- model-interpreter *
- modin ==0.
- numpy ==1.
- pandas ==0.
- pixiedust ==1.
- plotly ==4.
- ray ==0.
- scikit-learn ==0.
- shap ==0.
- torch ==1.
- tqdm ==4.
- xgboost ==0.
poetry.lock
pypi
- astunparse 1.6.3
- atomicwrites 1.3.0
- attrs 19.3.0
- certifi 2019.11.28
- chardet 3.0.4
- click 7.0
- cloudpickle 1.2.2
- colorama 0.4.3
- colour 0.1.5
- comet-git-pure 0.19.14
- comet-ml 2.0.18
- configobj 5.0.6
- cycler 0.10.0
- dask 2.10.1
- distributed 2.10.0
- everett 1.0.2
- fastparquet 0.3.2
- filelock 3.0.12
- fsspec 0.4.5
- funcsigs 1.0.2
- geojson 2.5.0
- heapdict 1.0.1
- idna 2.8
- importlib-metadata 1.5.0
- jinja2 2.11.1
- joblib 0.14.1
- jsonschema 3.0.2
- kiwisolver 1.1.0
- llvmlite 0.31.0
- lxml 4.5.0
- markdown 3.1.1
- markupsafe 1.1.1
- matplotlib 3.1.2
- modin 0.7.0
- more-itertools 8.2.0
- mpld3 0.3
- msgpack 0.6.2
- netifaces 0.10.9
- numba 0.48.0
- numpy 1.18.1
- nvidia-ml-py3 7.352.0
- packaging 20.1
- pandas 0.25.3
- pixiedust 1.1.18
- plotly 4.5.0
- pluggy 0.13.1
- protobuf 3.11.2
- psutil 5.6.7
- py 1.8.1
- pyparsing 2.4.6
- pyrsistent 0.15.7
- pytest 5.3.5
- python-dateutil 2.8.1
- pytz 2019.3
- pyyaml 5.3
- ray 0.8.1
- redis 3.4.1
- requests 2.22.0
- retrying 1.3.3
- scikit-learn 0.22.1
- scipy 1.4.1
- shap 0.34.0
- six 1.14.0
- sortedcontainers 2.1.0
- tblib 1.6.0
- thrift 0.13.0
- toolz 0.10.0
- torch 1.4.0
- tornado 6.0.3
- tqdm 4.42.0
- urllib3 1.25.8
- wcwidth 0.1.8
- websocket-client 0.57.0
- wheel 0.34.2
- wurlitzer 2.0.0
- xgboost 0.90
- zict 1.0.0
- zipp 2.1.0