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GitHub / CDCgov / SanitizeMePaired
Remove Host Reads from Paired End Sequencing
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/CDCgov%2FSanitizeMePaired
Stars: 1
Forks: 2
Open Issues: 0
License: apache-2.0
Language: Python
Repo Size: 9.55 MB
Dependencies:
90
Created: about 4 years ago
Updated: 3 months ago
Last pushed: about 4 years ago
Last synced: 3 months ago
Files
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Readme
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Dependencies
environment.yml
conda
- _libgcc_mutex 0.1.*
- _openmp_mutex 4.5.*
- atk 2.32.0.*
- bzip2 1.0.8.*
- ca-certificates 2019.11.28.*
- cairo 1.16.0.*
- certifi 2019.11.28.*
- cffi 1.14.0.*
- chardet 3.0.4.*
- colored 1.3.93.*
- cryptography 2.8.*
- expat 2.2.9.*
- fontconfig 2.13.1.*
- freetype 2.10.1.*
- fribidi 1.0.9.*
- gdk-pixbuf 2.38.2.*
- gettext 0.19.8.1.*
- glib 2.58.3.*
- gobject-introspection 1.58.2.*
- gooey 1.0.3.*
- graphite2 1.3.13.*
- gst-plugins-base 1.14.5.*
- gstreamer 1.14.5.*
- gtk2 2.24.32.*
- harfbuzz 2.4.0.*
- htslib 1.10.2.*
- icu 64.2.*
- idna 2.9.*
- jpeg 9c.*
- krb5 1.16.4.*
- ld_impl_linux-64 2.34.*
- libcurl 7.68.0.*
- libdeflate 1.3.*
- libedit 3.1.20170329.*
- libffi 3.2.1.*
- libgcc-ng 9.2.0.*
- libglu 9.0.0.*
- libgomp 9.2.0.*
- libiconv 1.15.*
- libpng 1.6.37.*
- libssh2 1.8.2.*
- libstdcxx-ng 9.2.0.*
- libtiff 4.1.0.*
- libuuid 2.32.1.*
- libwebp-base 1.1.0.*
- libxcb 1.13.*
- libxml2 2.9.10.*
- lz4-c 1.8.3.*
- minimap2 2.17.*
- ncurses 6.1.*
- olefile 0.46.*
- openssl 1.1.1f.*
- pango 1.42.4.*
- pathlib2 2.3.5.*
- pcre 8.44.*
- pillow 7.0.0.*
- pip 20.0.2.*
- pixman 0.38.0.*
- psutil 5.7.0.*
- pthread-stubs 0.4.*
- pycparser 2.20.*
- pyopenssl 19.1.0.*
- pypubsub 4.0.3.*
- pysocks 1.7.1.*
- python 3.6.9.*
- python_abi 3.6.*
- readline 8.0.*
- requests 2.23.0.*
- samtools 1.10.*
- setuptools 46.1.3.*
- six 1.14.0.*
- sqlite 3.30.1.*
- tk 8.6.10.*
- urllib3 1.25.7.*
- wheel 0.34.2.*
- wxpython 4.0.7.post2.*
- xorg-kbproto 1.0.7.*
- xorg-libice 1.0.10.*
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- xorg-libx11 1.6.9.*
- xorg-libxau 1.0.9.*
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- xorg-libxrender 0.9.10.*
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- xorg-xextproto 7.3.0.*
- xorg-xproto 7.0.31.*
- xz 5.2.4.*
- zlib 1.2.11.*
- zstd 1.4.4.*