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GitHub / CMILRESEARCH / UnifiedFeatureExtraction
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/CMILRESEARCH%2FUnifiedFeatureExtraction
Stars: 0
Forks: 0
Open Issues: 1
License: None
Language: Python
Repo Size: 83 KB
Dependencies:
225
Created: 4 months ago
Updated: about 2 months ago
Last pushed: about 2 months ago
Last synced: about 2 months ago
Files
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Dependencies
environment.yml
pypi
- absl-py ==1.4.0
- affine ==2.4.0
- aniso8601 ==9.0.1
- anndata ==0.9.1
- array-record ==0.5.0
- arrow ==1.2.3
- asciitree ==0.3.3
- astunparse ==1.6.3
- blinker ==1.6.2
- boto3 ==1.29.0
- botocore ==1.32.0
- branca ==0.6.0
- cachelib ==0.9.0
- cachetools ==5.3.1
- certifi ==2023.5.7
- click ==8.1.3
- click-plugins ==1.1.1
- cligj ==0.7.2
- cloudpickle ==3.0.0
- contourpy ==1.0.7
- ctk-cli ==1.5
- cycler ==0.11.0
- dask ==2023.11.0
- dicomweb-client ==0.59.1
- diskcache ==5.6.1
- distributed ==2023.11.0
- dm-tree ==0.1.8
- dynaconf ==3.1.12
- etils ==1.6.0
- fasteners ==0.18
- fastjsonschema ==2.16.3
- filelock ==3.12.3
- flask ==2.3.2
- flask-caching ==2.0.2
- flask-cors ==4.0.0
- flask-restx ==1.1.0
- flask-sqlalchemy ==3.0.3
- flatbuffers ==23.5.26
- folium ==0.14.0
- fonttools ==4.39.3
- fqdn ==1.5.1
- fsspec ==2023.4.0
- future ==0.18.3
- gast ==0.4.0
- gdal ==3.9.0
- gdown ==4.7.1
- girder-client ==3.1.21
- girder-slicer-cli-web ==1.4.1
- glymur ==0.12.8
- google-auth ==2.22.0
- google-auth-oauthlib ==1.0.0
- google-pasta ==0.2.0
- googleapis-common-protos ==1.62.0
- greenlet ==2.0.2
- grpcio ==1.56.2
- h11 ==0.14.0
- h5py ==3.9.0
- histomicstk ==1.3.0
- igraph ==0.10.6
- imagecodecs ==2023.3.16
- imageio ==2.32.0
- ipykernel ==6.22.0
- ipyleaflet ==0.17.3
- ipympl ==0.9.3
- ipython ==8.13.2
- ipython-genutils ==0.2.0
- ipywidgets ==8.0.6
- isoduration ==20.11.0
- itsdangerous ==2.1.2
- jmespath ==1.0.1
- joblib ==1.2.0
- jpype1 ==1.4.1
- jsonpointer ==2.4
- jupyter-client ==8.2.0
- jupyter-contrib-core ==0.4.2
- jupyter-contrib-nbextensions ==0.7.0
- jupyter-core ==5.3.0
- jupyter-highlight-selected-word ==0.2.0
- jupyter-nbextensions-configurator ==0.6.3
- jupyterlab-widgets ==3.0.7
- keras ==2.13.1
- kiwisolver ==1.4.4
- large-image ==1.23.1
- large-image-source-bioformats ==1.23.1
- large-image-source-deepzoom ==1.23.1
- large-image-source-dicom ==1.23.1
- large-image-source-dummy ==1.23.1
- large-image-source-gdal ==1.23.1
- large-image-source-mapnik ==1.23.1
- large-image-source-multi ==1.23.1
- large-image-source-nd2 ==1.23.1
- large-image-source-ometiff ==1.23.1
- large-image-source-openjpeg ==1.23.1
- large-image-source-openslide ==1.23.1
- large-image-source-pil ==1.23.1
- large-image-source-rasterio ==1.23.1
- large-image-source-test ==1.23.1
- large-image-source-tiff ==1.23.1
- large-image-source-tifffile ==1.23.1
- large-image-source-vips ==1.23.1
- lazy-loader ==0.3
- libclang ==16.0.6
- llvmlite ==0.40.0
- localtileserver ==0.7.1
- locket ==1.0.0
- loompy ==3.0.7
- lxml ==4.9.2
- mapnik ==4.0.0
- markdown ==3.4.4
- markupsafe ==2.1.2
- matplotlib ==3.7.1
- mistune ==3.0.1
- mpmath ==1.3.0
- msgpack ==1.0.7
- natsort ==8.4.0
- nbclassic ==1.0.0
- nbformat ==5.8.0
- nd2 ==0.8.0
- networkx ==3.1
- nimfa ==1.4.0
- notebook ==6.5.4
- numba ==0.57.0
- numcodecs ==0.11.0
- numpy-groupies ==0.9.22
- nvidia-cublas-cu12 ==12.1.3.1
- nvidia-cuda-cupti-cu12 ==12.1.105
- nvidia-cuda-nvrtc-cu12 ==12.1.105
- nvidia-cuda-runtime-cu12 ==12.1.105
- nvidia-cudnn-cu12 ==8.9.2.26
- nvidia-cufft-cu12 ==11.0.2.54
- nvidia-curand-cu12 ==10.3.2.106
- nvidia-cusolver-cu12 ==11.4.5.107
- nvidia-cusparse-cu12 ==12.1.0.106
- nvidia-nccl-cu12 ==2.19.3
- nvidia-nvjitlink-cu12 ==12.3.101
- nvidia-nvtx-cu12 ==12.1.105
- oauthlib ==3.2.2
- opencv-python-headless ==4.8.1.78
- openslide-python ==1.2.0
- opt-einsum ==3.3.0
- palettable ==3.3.3
- pandas ==2.0.1
- paquo ==0.6.1
- partd ==1.4.1
- patsy ==0.5.3
- pillow ==9.5.0
- pkgconfig ==1.5.5
- platformdirs ==3.5.0
- plotly ==5.14.1
- promise ==2.3
- protobuf ==3.20.3
- pyasn1 ==0.5.0
- pyasn1-modules ==0.3.0
- pydicom ==2.4.3
- pylibtiff ==0.6.1.1
- pynndescent ==0.5.10
- pyparsing ==3.0.9
- pyproj ==3.6.1
- pyreadr ==0.4.7
- python-bioformats ==4.0.7
- python-javabridge ==4.0.3
- pyvips ==2.2.1
- pyzmq ==25.0.2
- rasterio ==1.3.8
- requests-oauthlib ==1.3.1
- requests-toolbelt ==1.0.0
- resource-backed-dask-array ==0.1.0
- retrying ==1.3.4
- rsa ==4.9
- s3transfer ==0.7.0
- scanpy ==1.9.3
- scikit-image ==0.22.0
- scikit-learn ==1.2.2
- scipy ==1.10.1
- scooby ==0.7.2
- scvelo ==0.2.5
- seaborn ==0.12.2
- server-thread ==0.2.0
- session-info ==1.0.0
- shapely ==2.0.1
- snuggs ==1.4.7
- sortedcontainers ==2.4.0
- soupsieve ==2.4.1
- sqlalchemy ==2.0.12
- statsmodels ==0.14.0
- stdlib-list ==0.9.0
- sympy ==1.12
- tblib ==3.0.0
- tenacity ==8.2.2
- tensorboard ==2.13.0
- tensorboard-data-server ==0.7.1
- tensorflow ==2.13.0
- tensorflow-datasets ==4.9.4
- tensorflow-estimator ==2.13.0
- tensorflow-io-gcs-filesystem ==0.33.0
- tensorflow-metadata ==1.14.0
- termcolor ==2.3.0
- texttable ==1.6.7
- threadpoolctl ==3.1.0
- tifffile ==2023.4.12
- tiffslide ==2.1.2
- tifftools ==1.4.0
- toml ==0.10.2
- toolz ==0.12.0
- torch ==2.2.0
- tornado ==6.3.1
- tqdm ==4.65.0
- traittypes ==0.2.1
- triton ==2.2.0
- typing-extensions ==4.9.0
- tzdata ==2023.3
- umap-learn ==0.5.3
- unet ==0.7.7
- uri-template ==1.3.0
- urllib3 ==1.26.16
- uvicorn ==0.22.0
- webcolors ==1.13
- webencodings ==0.5.1
- werkzeug ==2.3.3
- widgetsnbextension ==4.0.7
- wrapt ==1.15.0
- wsidicom ==0.13.0
- xyzservices ==2023.5.0
- zarr ==2.14.2
- zict ==3.0.0