Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / CompEpigen / scMethrix
An R 📦 for fast and flexible scDNA methylation analysis
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/CompEpigen%2FscMethrix
Stars: 1
Forks: 3
Open Issues: 0
License: other
Language: R
Repo Size: 30.9 MB
Dependencies:
44
Created: over 3 years ago
Updated: 12 months ago
Last pushed: about 2 years ago
Last synced: 9 months ago
Files
Loading...
Readme
Loading...
Dependencies
DESCRIPTION
cran
- R >= 3.6 depends
- SingleCellExperiment * depends
- data.table >= 1.12.4 depends
- BPRMeth * imports
- BSgenome * imports
- Biostrings * imports
- DelayedArray * imports
- DelayedMatrixStats * imports
- GenomeInfoDb * imports
- GenomicRanges * imports
- HDF5Array * imports
- IRanges * imports
- Melissa * imports
- Metrics * imports
- RColorBrewer * imports
- Rtsne * imports
- S4Vectors * imports
- Seurat * imports
- SimDesign * imports
- SummarizedExperiment * imports
- bioDist * imports
- bsseq * imports
- doParallel * imports
- ggplot2 * imports
- graphics * imports
- impute * imports
- matrixStats * imports
- mclust * imports
- methods * imports
- methrix * imports
- missForest * imports
- missMDA * imports
- parallel * imports
- rtracklayer * imports
- stats * imports
- tools * imports
- umap * imports
- utils * imports
- BSgenome.Mmusculus.UCSC.mm10 * suggests
- BiocManager * suggests
- R.utils * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat * suggests