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GitHub / JIC-Image-Analysis / rna_fish_3d
Find RNA FISH spots in 3D microscopy data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JIC-Image-Analysis%2Frna_fish_3d
Stars: 0
Forks: 0
Open Issues: 0
License: mit
Language: Python
Repo Size: 21.5 KB
Dependencies:
33
Created: over 6 years ago
Updated: over 6 years ago
Last pushed: over 6 years ago
Last synced: about 1 year ago
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Dependencies
- jicscicomp/bioformats latest build
- jicscicomp/bioformats latest build
requirements.txt
pypi
- Pillow ==3.2.0
- chardet ==2.2.1
- cycler ==0.10.0
- dask ==0.9.0
- decorator ==4.0.9
- dtoolcore ==2.9.0
- iniparse ==0.4
- javapackages ==1.0.0
- jicbioimage.core ==0.15.0
- jicbioimage.illustrate ==0.6.1
- jicbioimage.segment ==0.4.0
- jicbioimage.transform ==0.6.0
- kitchen ==1.1.1
- lxml ==3.2.1
- matplotlib ==1.5.1
- networkx ==1.11
- numpy ==1.11.0
- pycurl ==7.19.0
- pygobject ==3.14.0
- pygpgme ==0.3
- pyliblzma ==0.5.3
- pyparsing ==2.1.3
- python-dateutil ==2.5.3
- pytz ==2016.4
- pyxattr ==0.5.1
- scikit-image ==0.12.3
- scipy ==0.17.0
- six ==1.10.0
- toolz ==0.7.4
- urlgrabber ==3.10
- yum-metadata-parser ==1.1.4