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GitHub / KiranJavkar / PRAWNS
PRAWNS: A fast and scalable bioinformatics tool that generates an efficient pan-genome representation of closely related whole genomes to provide a concise list of genomic features
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KiranJavkar%2FPRAWNS
Stars: 6
Forks: 1
Open Issues: 0
License: gpl-3.0
Language: C++
Repo Size: 6.7 MB
Dependencies:
6
Created: almost 4 years ago
Updated: over 1 year ago
Last pushed: over 1 year ago
Last synced: over 1 year ago
Topics: antibiotic-resistance, antimicrobial-resistance, association-studies, bacterial-gwas, bioinformatics, comparative-genomics, computational-biology, genome-analysis, genomics, microbial-genomics, pan-genome-analysis, parallel-programming, population-genomics, whole-genome-alignment, whole-genome-genotyping, whole-genome-sequencing
Files
Dependencies
- joblib >=0.14.1
- matplotlib >=3.1.2
- numpy >=1.21
- pandas >=1.0.2
- scikit-learn >=0.22.2.post1
- scipy >=1.4.1