Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub / MaastrichtU-IDS / knowledge-collaboratory

🔬 Website to help browse and publish Nanopublications

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/MaastrichtU-IDS%2Fknowledge-collaboratory

Stars: 7
Forks: 5
Open Issues: 6

License: mit
Language: TypeScript
Repo Size: 2.53 MB
Dependencies: 185

Created: over 2 years ago
Updated: 13 days ago
Last pushed: 13 days ago
Last synced: 13 days ago

Topics: biolink-model, nanopublications, rdf, text-annotation

Files

Readme

Dependencies

scripts/setup.py pypi

.github/workflows/deploy-frontend.yml actions

JamesIves/github-pages-deploy-action 3.7.1 composite
actions/checkout v2 composite
actions/setup-node v1 composite

.github/workflows/test-backend.yml actions

actions/checkout v2 composite
actions/setup-python v2 composite

.github/workflows/test-prod.yml actions

actions/checkout v2 composite
actions/setup-python v2 composite

backend/Dockerfile docker

tiangolo/uvicorn-gunicorn-fastapi python3.9 build

frontend/Dockerfile docker

node 16-alpine build

scripts/Dockerfile docker

python 3.8 build

frontend/package.json npm

@types/compression ^1.7.1 development
@types/express ^4.17.13 development
@types/node ^16.0.1 development
@types/react ^17.0.14 development
@types/react-dom ^17.0.9 development
concurrently ^6.2.0 development
nodemon ^2.0.10 development
serve ^12.0.0 development
ts-node ^10.0.0 development
typescript ^4.3.5 development
compression ^1.7.4
cors ^2.8.5
express ^4.17.1
graphql ^15.5.1
helmet ^4.6.0
lodash ^4.17.21

scripts/requirements.txt pypi

astro-frontend/Dockerfile docker

nginx stable-alpine build
node 18-alpine build

docker-compose.override.yml docker

docker-compose.prod.yml docker

docker-compose.yml docker

scripts/docker-compose.yml docker

astro-frontend/package.json npm

@tailwindcss/typography ^0.5.9 development
@types/cytoscape ^3.19.9 development
@types/cytoscape-dagre ^2.3.0 development
@types/cytoscape-euler ^1.2.0 development
@types/cytoscape-fcose ^2.1.1 development
@types/cytoscape-popper ^2.0.0 development
@types/n3 ^1.10.4 development
@types/node 18.14.1 development
@types/react ^18.0.21 development
@types/react-dom ^18.0.6 development
@typescript-eslint/eslint-plugin latest development
@typescript-eslint/parser latest development
@vite-pwa/astro ^0.0.5 development
eslint ^8.36.0 development
eslint-plugin-astro ^0.24.0 development
eslint-plugin-jsx-a11y ^6.7.1 development
eslint-plugin-react latest development
prettier ^2.8.4 development
prettier-plugin-astro ^0.8.0 development
@astrojs/image ^0.16.0
@astrojs/react ^2.1.0
@astrojs/tailwind ^3.1.0
@emotion/react ^11.4.1
@emotion/styled ^11.3.0
@fluentui/react ^8.68.0
@fontsource/open-sans ^4.5.14
@fontsource/roboto ^4.5.8
@mui/material ^5.11.10
@nanostores/react ^0.4.1
@rjsf/core ^4.2.0
@rjsf/fluent-ui ^4.2.0
astro ^2.1.0
astrojs-service-worker ^0.0.9
axios ^1.3.4
cytoscape ^3.23.0
cytoscape-cola ^2.5.0
cytoscape-cose-bilkent ^4.1.0
cytoscape-dagre ^2.4.0
cytoscape-euler ^1.2.2
cytoscape-fcose ^2.1.0
cytoscape-popper ^2.0.0
cytoscape-rdf ^0.0.11
cytoscape-spread ^3.0.0
highlight.js ^11.2.0
n3 ^1.16.3
nanopub-display git+https://github.com/vemonet/nanopub-display.git
nanostores ^0.7.4
prop-types ^15.8.1
react ^18.0.0
react-dom ^18.0.0
react-is ^18.2.0
react-simple-oauth2-login ^0.5.1
tailwindcss ^3.0.24

backend/pyproject.toml pypi

Authlib >=0.15.4
SPARQLWrapper >=1.8.5
fastapi >=0.68.1
gunicorn >=20.0.4
httpx >=0.21.1
itsdangerous >=2.0.1
pydantic [dotenv] >=1.9
python-multipart >=0.0.5
rdflib >=6.1.1
reasoner-pydantic >=2.2.3
requests >=2.23.0
uvicorn >=0.15.0

.github/workflows/codeql-analysis.yml actions

actions/checkout v2 composite
github/codeql-action/analyze v1 composite
github/codeql-action/init v1 composite

backend/requirements.txt pypi

aiohttp ==3.8.4
aiosignal ==1.3.1
anyio ==3.6.2
async-timeout ==4.0.2
attrs ==22.2.0
authlib ==1.2.0
blis ==0.7.9
catalogue ==2.0.8
certifi ==2022.12.7
cffi ==1.15.1
charset-normalizer ==3.1.0
click ==8.1.3
confection ==0.0.4
cryptography ==39.0.2
cupy-cuda110 ==11.6.0
cymem ==2.0.7
fastapi ==0.94.0
fastrlock ==0.8.1
filelock ==3.9.0
frozenlist ==1.3.3
gunicorn ==20.1.0
h11 ==0.14.0
html5lib ==1.1
httpcore ==0.16.3
httpx ==0.23.3
huggingface-hub ==0.13.2
idna ==3.4
isodate ==0.6.1
itsdangerous ==2.1.2
jinja2 ==3.1.2
langcodes ==3.3.0
markupsafe ==2.1.2
multidict ==6.0.4
murmurhash ==1.0.9
numpy ==1.24.2
nvidia-cublas-cu11 ==11.10.3.66
nvidia-cuda-nvrtc-cu11 ==11.7.99
nvidia-cuda-runtime-cu11 ==11.7.99
nvidia-cudnn-cu11 ==8.5.0.96
openai ==0.27.2
owlrl ==6.0.2
packaging ==23.0
pathy ==0.10.1
preshed ==3.0.8
prettytable ==2.5.0
pycparser ==2.21
pycryptodome ==3.17
pydantic ==1.10.6
pyparsing ==3.0.9
pyshacl ==0.20.0
python-dotenv ==1.0.0
python-multipart ==0.0.6
pyyaml ==6.0
rdflib ==6.2.0
reasoner-pydantic ==3.0.1
regex ==2022.10.31
requests ==2.28.2
rfc3986 ==1.5.0
ruamel-yaml ==0.17.21
ruamel-yaml-clib ==0.2.7
six ==1.16.0
smart-open ==6.3.0
sniffio ==1.3.0
spacy ==3.5.1
spacy-alignments ==0.9.0
spacy-legacy ==3.0.12
spacy-loggers ==1.0.4
spacy-transformers ==1.2.2
sparqlwrapper ==2.0.0
srsly ==2.4.6
starlette ==0.26.0.post1
thinc ==8.1.9
tokenizers ==0.13.2
torch ==1.13.1
tqdm ==4.65.0
transformers ==4.26.1
typer ==0.7.0
typing-extensions ==4.5.0
urllib3 ==1.26.15
uvicorn ==0.21.0
wasabi ==1.1.1
wcwidth ==0.2.6
webencodings ==0.5.1
wheel ==0.38.4
yarl ==1.8.2
yatiml ==0.10.0