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GitHub / MicTott / SpotSweeper
Spatially-aware quality control for spatial transcriptomics
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/MicTott%2FSpotSweeper
Stars: 0
Forks: 0
Open issues: 6
License: mit
Language: R
Size: 32.3 MB
Dependencies parsed at:
25
Created at: 8 months ago
Updated at: 2 days ago
Pushed at: 2 days ago
Last synced at: 1 day ago
Topics: bioconductor, quality-control, spatial-transcriptomics
Files
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Readme
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Dependencies
- actions/checkout v4 composite
- r-lib/actions/check-r-package v2 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/pkgdown.yaml
actions
- JamesIves/github-pages-deploy-action v4.5.0 composite
- actions/checkout v4 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
DESCRIPTION
cran
- R >= 4.3 depends
- BiocNeighbors * imports
- BiocParallel * imports
- MASS * imports
- SingleCellExperiment * imports
- SpatialExperiment * imports
- SummarizedExperiment * imports
- dbscan * imports
- stats * imports
- STexampleData * suggests
- escheR * suggests
- ggpubr * suggests
- knitr * suggests
- scuttle * suggests
- testthat * suggests