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GitHub / NVIDIA-Genomics-Research / GenomeWorks
SDK for GPU accelerated genome assembly and analysis
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NVIDIA-Genomics-Research%2FGenomeWorks
Stars: 275
Forks: 77
Open Issues: 74
License: apache-2.0
Language: Cuda
Repo Size: 20.7 MB
Dependencies:
12
Created: about 5 years ago
Updated: 12 days ago
Last pushed: about 1 month ago
Last synced: 1 day ago
Topics: alignment, cuda, genomics, gpu, mapping, nvidia, partial-order-alignment, poa, python-api
Files
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Readme
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Dependencies
- flake8 ==3.7.8
- pydocstyle ==5.0.1
- sphinx ==2.3.1
- Cython ==0.29.12
- intervaltree ==3.1.0
- matplotlib ==3.3.2
- networkx ==2.4
- numpy ==1.16.3
- pytest ==4.4.1
- setuptools >=41.4.0
- sortedcollections ==1.1.2
- tqdm ==4.31.1