Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / OATML-Markslab / ProteinNPT
Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/OATML-Markslab%2FProteinNPT
Stars: 68
Forks: 4
Open Issues: 3
License: mit
Language: Python
Repo Size: 628 KB
Dependencies:
83
Created: 7 months ago
Updated: 9 days ago
Last pushed: about 2 months ago
Last synced: 6 days ago
Topics: protein-design
Files
Loading...
Readme
Loading...
Dependencies
setup.py
pypi
requirements.txt
pypi
- GitPython ==3.1.41
- Jinja2 ==3.1.3
- MarkupSafe ==2.1.5
- PyYAML ==6.0.1
- aiohttp ==3.9.3
- aiosignal ==1.3.1
- appdirs ==1.4.4
- astroid ==3.0.3
- async-timeout ==4.0.3
- attrs ==23.2.0
- biopython ==1.83
- certifi ==2024.2.2
- charset-normalizer ==3.3.2
- click ==8.1.7
- datasets ==2.17.0
- dill ==0.3.8
- docker-pycreds ==0.4.0
- filelock ==3.13.1
- frozenlist ==1.4.1
- fsspec ==2023.10.0
- gitdb ==4.0.11
- h5py ==3.10.0
- huggingface-hub ==0.20.3
- idna ==3.6
- isort ==5.13.2
- joblib ==1.3.2
- mccabe ==0.7.0
- mpmath ==1.3.0
- multidict ==6.0.5
- multiprocess ==0.70.16
- networkx ==3.2.1
- numpy ==1.26.4
- nvidia-cublas-cu12 ==12.1.3.1
- nvidia-cuda-cupti-cu12 ==12.1.105
- nvidia-cuda-nvrtc-cu12 ==12.1.105
- nvidia-cuda-runtime-cu12 ==12.1.105
- nvidia-cudnn-cu12 ==8.9.2.26
- nvidia-cufft-cu12 ==11.0.2.54
- nvidia-curand-cu12 ==10.3.2.106
- nvidia-cusolver-cu12 ==11.4.5.107
- nvidia-cusparse-cu12 ==12.1.0.106
- nvidia-nccl-cu12 ==2.19.3
- nvidia-nvjitlink-cu12 ==12.3.101
- nvidia-nvtx-cu12 ==12.1.105
- packaging ==23.2
- pandas ==2.2.0
- pillow ==10.2.0
- platformdirs ==4.2.0
- proteinnpt ==1.1
- protobuf ==4.25.2
- psutil ==5.9.8
- pyarrow ==15.0.0
- pyarrow-hotfix ==0.6
- pylint ==3.0.3
- python-dateutil ==2.8.2
- pytz ==2024.1
- regex ==2023.12.25
- requests ==2.31.0
- safetensors ==0.4.2
- scikit-learn ==1.4.0
- scipy ==1.12.0
- semantic-version ==2.10.0
- sentry-sdk ==1.40.3
- setproctitle ==1.3.3
- setuptools-rust ==1.8.1
- six ==1.16.0
- smmap ==5.0.1
- sympy ==1.12
- threadpoolctl ==3.2.0
- tokenizers ==0.15.1
- tomli ==2.0.1
- tomlkit ==0.12.3
- torch ==2.2.0
- torchvision ==0.17.0
- tqdm ==4.66.2
- transformers ==4.37.2
- triton ==2.2.0
- typing_extensions ==4.9.0
- tzdata ==2023.4
- urllib3 ==2.2.0
- wandb ==0.16.3
- xxhash ==3.4.1
- yarl ==1.9.4